| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_1399 |
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| Symbol | |
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| ID | 4021876 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 1564824 |
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| End bp | 1565504 |
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| Gene Length | 681 bp |
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| Protein Length | 226 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637961591 |
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| Product | tetratricopeptide TPR_2 |
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| Protein accession | YP_568537 |
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| Protein GI | 91975878 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4783] Putative Zn-dependent protease, contains TPR repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.972416 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.953611 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCTTCTG GATTTTTCGC CTGCCGTCAC CTGCCTCGCG CGGCCTTGTT CGCCGCGCTA
TTGTCGCTGG CTCCTTTTGC CGCGCAGGCG CAGGCGCCTG ACGGATCGCC GAAGACCGCG
CCTCCGAAGT ATCATCCGGA AAAGCCGCTC GATGTGCCGC CGTCGCCGCC GGCCAAGCTT
CCGCGCGTCG GTGGCGATCA GGTCAAGGGT CTGGATTTCC TGTTCGGCGC GCTGAAGGCG
GCGCCGGACC AGGCCAGCGC CAAGCATGTC GAGGCGCGGA TCTGGGCGCT GTGGAGCAAG
ACCCCGAGCG ACACTGCCGC GCTGCTGATG GCGCGCTCCA AGGTCGCGGT GGAGGCCAAG
CAATACGACG TCGCGGTGAA GCTGCTCGAC GCCGTGGTCA AGCTCCGGCC AGATTATGTC
GAAGGCTGGA ATCGCCGCGC CACCATCTTC TATCTGCAGA ACAATTATGT CCGCTCGCTC
GGCGATATCG AGCAGGTGCT GATGCGCGAG CCGCGCCATT TCGGCGCGCT GGCCGGCCTC
GGCATGATCA TGCAGGAGCT GGGCGACGAC AAGCGTGCGC TCGAAGCGTT CCGAAAGGCG
TTAGTGGTCA ACCCGCATCT CGACAAGCTT CCCGACCTCG TGAAGACGCT GTCCGAAAAG
GTCGAAGGCC GCGATATCTG A
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| Protein sequence | MASGFFACRH LPRAALFAAL LSLAPFAAQA QAPDGSPKTA PPKYHPEKPL DVPPSPPAKL
PRVGGDQVKG LDFLFGALKA APDQASAKHV EARIWALWSK TPSDTAALLM ARSKVAVEAK
QYDVAVKLLD AVVKLRPDYV EGWNRRATIF YLQNNYVRSL GDIEQVLMRE PRHFGALAGL
GMIMQELGDD KRALEAFRKA LVVNPHLDKL PDLVKTLSEK VEGRDI
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