| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_1052 |
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| Symbol | |
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| ID | 4021528 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 1205398 |
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| End bp | 1207413 |
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| Gene Length | 2016 bp |
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| Protein Length | 671 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637961244 |
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| Product | transketolase |
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| Protein accession | YP_568191 |
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| Protein GI | 91975532 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0021] Transketolase |
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| TIGRFAM ID | [TIGR00232] transketolase, bacterial and yeast |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.25792 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAACATCT CTGCACGCGA TATCCACGAC GAAGTCAGCC ACGGCGAAAT GGCCAATGCG
GTCCGCTTCC TCGCGATCGA CGCAGTCGAA AAGGCGAAGT CCGGCCACCC CGGAATGCCG
ATGGGCATGG CCGACGTCGC CACCGTGCTG TTCACCCGCT TCATGAAGTT CGATGCCGCC
GATCCGACCT GGCCCGACCG CGATCGTTTC GTGCTGTCGG CCGGCCATGG CTCGATGCTG
CTCTACGCGC TGCTGCATCT GACCGGCTAC AAAGAGGTCA CGATCGATGA GTTGAAGGCG
TTCCGGCAGT GGGGCTCGAA GACGCCCGGC CATCCGGAAT ACGGCCACAC CGAAGGCGTC
GAGACCACCA CCGGCCCGCT CGGGCAGGGG CTCGCGACCT CGGTCGGCAT GGCGCTCGCC
GAGCGGATGC TGAACGCGCG TTACGGCGAT GCGCTGGTCG ATCACTTCAC CTATGTGATC
GCCGGCGACG GCTGCCTGAT GGAAGGCGTC AGCCACGAGG CGATCTCGCT CGCCGGTCAT
CTCAAGCTCA ATCGCCTGAT CGTGCTGTGG GACGACAACC ACATCTCGAT CGACGGCGAA
ACCTCACTGT CGTGCTCGGA TGATCAGCTC GCGCGCTTCG CCGCGTCGGG CTGGGCCACC
ACCCGCGTCG ATGGCCATGA TCCGGAGGCG GTCGAGGCCG CGATCGAGCA GGCCAGGAAA
AGCGACCGGC CGTCCCTGAT CGCCTGCCGC ACCAAGATCG GCTTCGGCTC GCCCAAGGTC
GAGGGCACCG AGAAAGCCCA TGGCGCGCCG CTCGGCGCCG ACGAGGTCGA GAAGACCCGC
GCTGCGCTGA ACTGGCCGCA CCCTCCGTTC GAAGTGCCGG ACGCGGTTCT TGCGCGCTGG
CGCGAGGCGG GCAGCCGCGG CAAGGCCGCG CATCAGGCGT GGACCGAGCG GCTCGGCAAT
CTCGATGCGG CGACCCGCGC CGGCTTCGAG AACGTCCTCG CCGGCAAGCT GTCGGCCGAC
TACGAGCCCG CGCTGAAAGC GCTGATCGCG AATTTCGCAT CCGACCAGCC GTCGATCGCC
ACCCGGCAGG CTTCGCAGCT CACCATCAAC GCGCTGGTGC CGGCGTCGCC GAACCTGCTC
GGCGGCTCGG CTGACCTGAC CCATTCCAAC CTGACCCACG CCAAGGGTTC GGTTTCGGTG
AAGCCCGGCG CCTATGGCGG CAGCTATCTG CACTACGGCA TTCGCGAATT CGGCATGGCG
GCGGCGATGA ACGGCCTCGC CCTGCACGGC GGCTTCATTC CCTATGGCGG CACCTTCCTG
GTGTTCGCCG ACTACAGCCG TCCGGCAATA CGGCTCGCGG CGCTGATGGG GGTGCGGGTG
ATCCATGTGA TGACCCACGA CTCGATCGGC CTCGGCGAGG ACGGCCCGAC CCATCAGCCG
GTCGAGCATG TCTCGTCGCT ACGGGCGATC CCGAACCTGC TGGTGTTTCG TCCGGCGGAC
GCGATCGAGA CCGCGCAGGC CTGGGACTGC GCGCTGAAGC AGGCGAGCCG GCCCTCGGTG
CTGGCTCTGT CGCGGCAGGC GCTGCCGATG TTGCCGCGGC CGAACGGCGT GAACGACAAT
CCGGTCGGGC GCGGCGCCTA CCTGGTGATC GATCCGGGCA AGCGCGACGT CACTTTGATC
GCGACCGGCT CGGAAGTCTC GCTGGCGCTG GAAGCGGCGT GCAAGCTCGA GGGCGAAGGC
ATCAAGGCGG CGGTGGTCTC GGCGCCCTGT TTCGAATTGT TCGCCGAACA GGACGAGGCC
TACCGCGCGA CCGTGCTTGG GACTGCGCCG CGGATCGGCG TCGAAGCGGC GCGCGATATC
GATTGGCGGC GTTGGATCGG CGATGGCGGC GCCTTCGTCG GCATGACCGG GTTCGGCGCC
TCGGCGCCGG CGCCGGTGCT GTACCAGAAG TTCGGTATCA CCGCAGATGC GGTCACGGAC
GCGGCCAAGG CCGCGATCGC TCGCAGCAAA CATTGA
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| Protein sequence | MNISARDIHD EVSHGEMANA VRFLAIDAVE KAKSGHPGMP MGMADVATVL FTRFMKFDAA
DPTWPDRDRF VLSAGHGSML LYALLHLTGY KEVTIDELKA FRQWGSKTPG HPEYGHTEGV
ETTTGPLGQG LATSVGMALA ERMLNARYGD ALVDHFTYVI AGDGCLMEGV SHEAISLAGH
LKLNRLIVLW DDNHISIDGE TSLSCSDDQL ARFAASGWAT TRVDGHDPEA VEAAIEQARK
SDRPSLIACR TKIGFGSPKV EGTEKAHGAP LGADEVEKTR AALNWPHPPF EVPDAVLARW
REAGSRGKAA HQAWTERLGN LDAATRAGFE NVLAGKLSAD YEPALKALIA NFASDQPSIA
TRQASQLTIN ALVPASPNLL GGSADLTHSN LTHAKGSVSV KPGAYGGSYL HYGIREFGMA
AAMNGLALHG GFIPYGGTFL VFADYSRPAI RLAALMGVRV IHVMTHDSIG LGEDGPTHQP
VEHVSSLRAI PNLLVFRPAD AIETAQAWDC ALKQASRPSV LALSRQALPM LPRPNGVNDN
PVGRGAYLVI DPGKRDVTLI ATGSEVSLAL EAACKLEGEG IKAAVVSAPC FELFAEQDEA
YRATVLGTAP RIGVEAARDI DWRRWIGDGG AFVGMTGFGA SAPAPVLYQK FGITADAVTD
AAKAAIARSK H
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