Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_0940 |
Symbol | |
ID | 4021415 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | + |
Start bp | 1055775 |
End bp | 1058330 |
Gene Length | 2556 bp |
Protein Length | 851 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 637961131 |
Product | hypothetical protein |
Protein accession | YP_568079 |
Protein GI | 91975420 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR02302] conserved hypothetical protein TIGR02302 |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGAGCGGAC GCAGTCCCGA CCCGTCACAG ACCCCGCGAG ATCCAGACGC GATGGCGCGG CTGCAACTTG CCACGGCTCT GCGACGTGCG ACCTTCGCGA TCGCCTGGGA GCGGAGCTGG CCGCTTCTCG TCCGTCTGCT CAGCGTCGTC GGCCTGTTTC TGGCTGCGTC GTGGGCCGGT CTGTGGCTCT CGCTGCCTTT CGTTGGCCGC GTTGCCGGCC TTGCGCTGTT TGCGGCGCTG GCGGTGGTCG CGCTGCTTCC CGTGCTCAAG TTCCGCTGGC CGAGCCGCGA CGACGCGCTC GCCCGGCTCG ATCGCGCCAC CGGGCTGAAG CATCGCCCCG CGACCGCGCT GACCGATACG CTGGCCTCCA GCGATCCGGT GGCGCAGGCG CTGTGGCAGG CGCAGCGCGA GCGAACGCTG GCGGCGATCA AAGGCGTCAG CGCCGGATTG CCGGCGCCGC GGCTGCCGAA GCACGACCCA TGGGCGCTGC GCGCGCTGGT CGCGGTGCTG CTGGTCGCGA CCTTCATCGC CGCCGGTGAA GAGCGCACCG CGCGCGTGGC GGCGGCGTTC GATTGGAACG GAGCGCTGGC TGCGCCGAAC GTCCGGGTCG ACGCCTGGGT GACGCCGCCG GTCTACACCA ACAAGCCGCC GATCGTGCTG TCGGCTGCGA ACAGGACTCT CGCCTCCTCG AACGAAGCGG CGCTGCCGGT TCCGGCCGGC TCGACGCTAC TGGTGCGCTC CAGCGGCGGC GATCTCGACG TTGCGATCAG CGGCGGCGTC GTCGAGGCGT TGCCGGAGGG CGAAGCGCCG AAGGGCGCCA GCGAGCGGCG CTACAAGATC ACCGGCGACG GCACGGCGCA TGTTCGTGCG CCGTCCGGTC AGCCGCAATG GTCGTTCAAG GCGACGCCGG ATCATCCGCC GTCGATCGCT CTGGCGAAGG AGCCGGAGCG GCAGGCGCGC GGATCGTTGC AACTGTCCTA CAAGCTCGAA GACGATTACG GCGTGACCGA AGCCCATGCG CTGTTCGCCG CATCGCCCTC CGCGACCGAT CAGAACTCCG ATACGCCGCG GCCGCTCTAT GAGCCGCCGC AGTTTGCGCT GACGCTGCCG AATGCGCGGA CCCGCGCCGG CGTCGGCCAG ACCGTCAAGG ATATCAGCGA CGATCCCTAT GCGGGCGCCG AGGTCACGGT GACGCTGACG GCGAAGGACG AGGCCGGCAA TGAGGGCCGC AGCGAGCCCA CCACGATGCG GCTGCCGGAG CGACTGTTCA CCAAGCCGTT GGCGCGGGCG CTGATCGAAC AGCGCCGCAT TCTCGCGCTC GACGCCAACA AGAACGCGCA GGTCTACGCC GCGCTCGACG CGCTGATGAT CGCGCCGGAA GCATTCACGC CGGAGGCCGG CCAGTATCTC GGCCTCTATA CCGTTGCCGA CCAGCTCGAG CGCGCGCGCA CCGACGACGC GCTGCGCGAG GTCGTCGGCA ATCTCTGGTC ACTCGCGCTC AGCATCGAGG ACGGCAATAC ATCGGACGTC GAAAAGGCGC TGCGCGCCGC GCAGGACGCG CTGAAGCAGG CGCTGGAGCG TGGCGCCTCC GACGAGGAGA TCAAGAAGCT CACCGAGAAT TTGCGCGCCG CGCTCGACAA CTACATGCGC CAGCTCGCCG AGCAGCTCAA AAACAATCCG CAGCAGCTCG CCCGTCCGCT CGATCCCAAC GCGCGGGTGA TGCGGCAGCA GGACCTCAAC AACATGATCG AGCGGATGGA GCGGCTGTCG CGCTCCGGCG ACAAGGAAGC CGCCAAGCAG TTGCTCGAAC AGCTGGCGCA GATGCTGGAA AACCTGCAGA TGGCGCAGCC CGGCCAGGGC GGCGACGCCG ACATGCAGCA GGCGATGAAC GAACTCGGCG ACATGATCCG CAAGCAGCAG CAATTGCGGG ACAAGACCTT CAAGCAGGGT CAGGACCAGC GGCGCGACCG GATGCGCGGC CAGAAGGGCG AGCAGAATCT CGGCGATCTG CAGCAGGATC AGCAGAACCT GCAGGACCGG CTGCGCAAGC TGCAGCAGGA GCTCGCCAAG CGCGGTCTCG GCCAGGCCCA GCGCGGCCAG AAAGGCGAGC CGGGGCAGCA AGGCGAACAG GGCGAGCAGG GCGAGCAGAG CGAGGGCGGC CTCGATCAGG CCGAGTCCGC GATGGGCGAC GCCGAAGGCC GGCTCGGCGA AGGCAACGCC GACAGCGCGG TCGACTCGCA GGGCCGCGCG CTCGAGGCGT TGCGCAAGGG TGCGCAGAAG CTCGCCGAGG CGATGCAGCA GGGCGACCAG CCGGGCCAGG GCGAAGGGCC GGGCAATCGC CCCGGTCGCC AGCAGAGCAG CGGCAACGAC ACCGACCCGC TCGGCCGGCC GTTGCATGGC CGCGAATTCG GCGACGATCT GTCGGTAAAA ATTCCCGGCG AGATCGATGT TCAGCGCGTC CGCCGCATCC TCGAAGAACT CCGCCGCCGC CTCGGCGATT CAGCGCGACC ACAGCTCGAA CTCGACTACA TCGAGCGGCT GCTGAAAGAT TACTGA
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Protein sequence | MSGRSPDPSQ TPRDPDAMAR LQLATALRRA TFAIAWERSW PLLVRLLSVV GLFLAASWAG LWLSLPFVGR VAGLALFAAL AVVALLPVLK FRWPSRDDAL ARLDRATGLK HRPATALTDT LASSDPVAQA LWQAQRERTL AAIKGVSAGL PAPRLPKHDP WALRALVAVL LVATFIAAGE ERTARVAAAF DWNGALAAPN VRVDAWVTPP VYTNKPPIVL SAANRTLASS NEAALPVPAG STLLVRSSGG DLDVAISGGV VEALPEGEAP KGASERRYKI TGDGTAHVRA PSGQPQWSFK ATPDHPPSIA LAKEPERQAR GSLQLSYKLE DDYGVTEAHA LFAASPSATD QNSDTPRPLY EPPQFALTLP NARTRAGVGQ TVKDISDDPY AGAEVTVTLT AKDEAGNEGR SEPTTMRLPE RLFTKPLARA LIEQRRILAL DANKNAQVYA ALDALMIAPE AFTPEAGQYL GLYTVADQLE RARTDDALRE VVGNLWSLAL SIEDGNTSDV EKALRAAQDA LKQALERGAS DEEIKKLTEN LRAALDNYMR QLAEQLKNNP QQLARPLDPN ARVMRQQDLN NMIERMERLS RSGDKEAAKQ LLEQLAQMLE NLQMAQPGQG GDADMQQAMN ELGDMIRKQQ QLRDKTFKQG QDQRRDRMRG QKGEQNLGDL QQDQQNLQDR LRKLQQELAK RGLGQAQRGQ KGEPGQQGEQ GEQGEQSEGG LDQAESAMGD AEGRLGEGNA DSAVDSQGRA LEALRKGAQK LAEAMQQGDQ PGQGEGPGNR PGRQQSSGND TDPLGRPLHG REFGDDLSVK IPGEIDVQRV RRILEELRRR LGDSARPQLE LDYIERLLKD Y
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