Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_0745 |
Symbol | |
ID | 4021218 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | + |
Start bp | 835419 |
End bp | 836774 |
Gene Length | 1356 bp |
Protein Length | 451 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 637960934 |
Product | sugar transferase |
Protein accession | YP_567884 |
Protein GI | 91975225 |
COG category | [G] Carbohydrate transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0702] Predicted nucleoside-diphosphate-sugar epimerases [COG2148] Sugar transferases involved in lipopolysaccharide synthesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGCCACTGG GTGAAAGTTC AGGGGCAGGT CAATTTGAGA AGATAGCGAG TGGGCATTTC GGCGTCGAAA TACGGGAAGC AAGAAGATAC TCTTGCGGGG GACACAGCGC CCGACTATGC GTTCACTCCT TGATGGAGGT GAAGCAGGTG AAACTAGCTA TTACCGGTGC TTCAGGCGCC ATTGGGCTCC CTTTGGCAAG AGCTTTTCTG GCAAAGGGTG CTCAACTACT CCTTGTGGGG CGAGACCCAA ACAGGCTGAG AGAACTATTT TCAGGTGCTG AAAGCTGTAG CTATGAAGAA ATGGCCCAGC GTCTCGAGGG ATATGACGGT CTACTTCACC TTGCGGTTTT GAACAACAAC GTTGAGGCTA CCAGAGAAGA TTACGTCAAA GCTAATGTAG ATCTAACCAA CGCAGCACTG CTTGCGGCTC AACAAGCTGG GGTTGATCGT TTCGTCTATG TATCGACGAC GCAAGCGCTA GAAAGCCGAA ACTTTTCCAA TTATGCCTCA AGTAAGCGAA TCGCTTCCGA GCACGTCGCC GCAGCGGAAA ACATAGAGGT TCACATTCTA TACCTGTCGG CCGTGATCGG CGAGAAATTA ACCGGCAGAA TGGCAATTCT CAATAGTGCC CCCGCCCCCC TGCGAAAGCA CTTTCTCGAC CTCTACGCTG CAATCACACC TGTTACTGAT ATTGACACTG TTATAGACAC CTGCTGGGAA GCGCTAATAG GAAACAATAT TCCGAAAGAG CAAATAGTTG CTCGAAATCA ATCCAACAAT ACAGCTTTCG AGGCAGCCAA GCGCAGTATA GATCTGGCAG CTTCGCTTGT CATATTGATC CCCTTCTTCT GGGTTCTGGT CATTATTTGG GTCGCCATCC GTTTGCAATC ACCTGGGCCG GGGATATTCG CGCAGCCAAG AGTCGGCAAA AACGGGCAGA TTTTCACCTG CTACAAGTTC CGAACGATGT CGAAAGATTC GCCCAATGTT GGAACACATG AAGCCTCAGG CTCCTTGGTA ACACCATTGG GAAGAATCCT ACGCCGCACA AAACTCGACG AGCTTCCTCA AGCCTTGAAC ATTCTCCTGA ATCAAATGAG CCTCGTCGGA CCTCGTCCCT GCCTTCCAAA TCAGGCCGCT GTGATTGCAG AGCGTCAGAA ACTTGGCGTG TTTGACATTA AGCCCGGGAT AACAGGATTG GCGCAAATCA AGCAGATTGA CATGAGCCAG CCAGAACGCC TGGCGCAAAT GGACTCGCGT TACGCAAAGC TGCGATCTTT GCGGCTAGAC CTGAGCATCA TGCTCCAAAC CGCGCTGGGG CACGGGAACG GCGATGCAAT GGACGGCAAG AGTTGA
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Protein sequence | MPLGESSGAG QFEKIASGHF GVEIREARRY SCGGHSARLC VHSLMEVKQV KLAITGASGA IGLPLARAFL AKGAQLLLVG RDPNRLRELF SGAESCSYEE MAQRLEGYDG LLHLAVLNNN VEATREDYVK ANVDLTNAAL LAAQQAGVDR FVYVSTTQAL ESRNFSNYAS SKRIASEHVA AAENIEVHIL YLSAVIGEKL TGRMAILNSA PAPLRKHFLD LYAAITPVTD IDTVIDTCWE ALIGNNIPKE QIVARNQSNN TAFEAAKRSI DLAASLVILI PFFWVLVIIW VAIRLQSPGP GIFAQPRVGK NGQIFTCYKF RTMSKDSPNV GTHEASGSLV TPLGRILRRT KLDELPQALN ILLNQMSLVG PRPCLPNQAA VIAERQKLGV FDIKPGITGL AQIKQIDMSQ PERLAQMDSR YAKLRSLRLD LSIMLQTALG HGNGDAMDGK S
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