Gene RPD_0745 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_0745 
Symbol 
ID4021218 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp835419 
End bp836774 
Gene Length1356 bp 
Protein Length451 aa 
Translation table11 
GC content51% 
IMG OID637960934 
Productsugar transferase 
Protein accessionYP_567884 
Protein GI91975225 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0702] Predicted nucleoside-diphosphate-sugar epimerases
[COG2148] Sugar transferases involved in lipopolysaccharide synthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCCACTGG GTGAAAGTTC AGGGGCAGGT CAATTTGAGA AGATAGCGAG TGGGCATTTC 
GGCGTCGAAA TACGGGAAGC AAGAAGATAC TCTTGCGGGG GACACAGCGC CCGACTATGC
GTTCACTCCT TGATGGAGGT GAAGCAGGTG AAACTAGCTA TTACCGGTGC TTCAGGCGCC
ATTGGGCTCC CTTTGGCAAG AGCTTTTCTG GCAAAGGGTG CTCAACTACT CCTTGTGGGG
CGAGACCCAA ACAGGCTGAG AGAACTATTT TCAGGTGCTG AAAGCTGTAG CTATGAAGAA
ATGGCCCAGC GTCTCGAGGG ATATGACGGT CTACTTCACC TTGCGGTTTT GAACAACAAC
GTTGAGGCTA CCAGAGAAGA TTACGTCAAA GCTAATGTAG ATCTAACCAA CGCAGCACTG
CTTGCGGCTC AACAAGCTGG GGTTGATCGT TTCGTCTATG TATCGACGAC GCAAGCGCTA
GAAAGCCGAA ACTTTTCCAA TTATGCCTCA AGTAAGCGAA TCGCTTCCGA GCACGTCGCC
GCAGCGGAAA ACATAGAGGT TCACATTCTA TACCTGTCGG CCGTGATCGG CGAGAAATTA
ACCGGCAGAA TGGCAATTCT CAATAGTGCC CCCGCCCCCC TGCGAAAGCA CTTTCTCGAC
CTCTACGCTG CAATCACACC TGTTACTGAT ATTGACACTG TTATAGACAC CTGCTGGGAA
GCGCTAATAG GAAACAATAT TCCGAAAGAG CAAATAGTTG CTCGAAATCA ATCCAACAAT
ACAGCTTTCG AGGCAGCCAA GCGCAGTATA GATCTGGCAG CTTCGCTTGT CATATTGATC
CCCTTCTTCT GGGTTCTGGT CATTATTTGG GTCGCCATCC GTTTGCAATC ACCTGGGCCG
GGGATATTCG CGCAGCCAAG AGTCGGCAAA AACGGGCAGA TTTTCACCTG CTACAAGTTC
CGAACGATGT CGAAAGATTC GCCCAATGTT GGAACACATG AAGCCTCAGG CTCCTTGGTA
ACACCATTGG GAAGAATCCT ACGCCGCACA AAACTCGACG AGCTTCCTCA AGCCTTGAAC
ATTCTCCTGA ATCAAATGAG CCTCGTCGGA CCTCGTCCCT GCCTTCCAAA TCAGGCCGCT
GTGATTGCAG AGCGTCAGAA ACTTGGCGTG TTTGACATTA AGCCCGGGAT AACAGGATTG
GCGCAAATCA AGCAGATTGA CATGAGCCAG CCAGAACGCC TGGCGCAAAT GGACTCGCGT
TACGCAAAGC TGCGATCTTT GCGGCTAGAC CTGAGCATCA TGCTCCAAAC CGCGCTGGGG
CACGGGAACG GCGATGCAAT GGACGGCAAG AGTTGA
 
Protein sequence
MPLGESSGAG QFEKIASGHF GVEIREARRY SCGGHSARLC VHSLMEVKQV KLAITGASGA 
IGLPLARAFL AKGAQLLLVG RDPNRLRELF SGAESCSYEE MAQRLEGYDG LLHLAVLNNN
VEATREDYVK ANVDLTNAAL LAAQQAGVDR FVYVSTTQAL ESRNFSNYAS SKRIASEHVA
AAENIEVHIL YLSAVIGEKL TGRMAILNSA PAPLRKHFLD LYAAITPVTD IDTVIDTCWE
ALIGNNIPKE QIVARNQSNN TAFEAAKRSI DLAASLVILI PFFWVLVIIW VAIRLQSPGP
GIFAQPRVGK NGQIFTCYKF RTMSKDSPNV GTHEASGSLV TPLGRILRRT KLDELPQALN
ILLNQMSLVG PRPCLPNQAA VIAERQKLGV FDIKPGITGL AQIKQIDMSQ PERLAQMDSR
YAKLRSLRLD LSIMLQTALG HGNGDAMDGK S