Gene RPD_0578 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_0578 
Symbol 
ID4021046 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp650456 
End bp651715 
Gene Length1260 bp 
Protein Length419 aa 
Translation table11 
GC content67% 
IMG OID637960765 
Productglycosyl transferase family protein 
Protein accessionYP_567717 
Protein GI91975058 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1215] Glycosyltransferases, probably involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGGCTG ACCGACTTGC GGCTCGCGGT AGCGCCGTCG TTGCTATTCC CGCCCACGAT 
GAAGCTCAAC GAATTCATCG CTGTCTTTCG GCGCTGGCCA TGCAGCGTGA CGAAGTCGGC
GCCCCGATCC GCGCCGGCGC GTTCGAGATC CTGGTCTTCG CCAATAATTG CACCGATGCC
ACCCCAGACG TCGTGCGAAC CTTCGCGGCT TCCGTGCCGC ATCCCATCCT CGTCATCGAG
GCGCAGTTGC CGCCCGGGCA GCGCTCCGCT GGGGCCGCAC GCAAGCACGC GATGGATCTG
GCTGCCGCGC GGCTGAACGA ACGGGGTGCG TTCGACGGCG TAATTCTCAC CACCGACGCC
GATAGCTGCG TTGCGCCCAC TTGGTTCGCC GCGACGATGC GGGAACTGCA GAGCGGCGTC
GATTGCGTGG CGGGCTACAT CGACGCCGAG CCGTTCGAAA TCGTCAGTCT CGGCGATGCG
TTTCTCGCGC GCGGCCGGCT CGAAGATACC TACCTCCGAC TCCTCGCGGA GATCGACGCG
CGCTGCGACC CGCGGCCGCA CGACCCTTGG CCGAACCATC GGGTGTCGTC CGGCGCGAGC
CTGGCGCTGA CGCTCGCCGC TTACGAGGCG GTGGGCGGAT TGCCGCCGCG CCCGGTGGGC
GAAGACGTCG CCCTGACGGC CGCGCTCGAG CACTTCGGCT TCAAGGTGCG CCATTCGATG
GCTGTATCGG TGTCGACATC ATGCCGGCTC GACGGCCGTG CCCAGGGCGG AGCGGCCGAT
ACGATGCGGC TGCGCCATGC GGAGACCAAT GCCCCCTGTG ACGACGACCT CGAACCGGCC
CTGCAAGCGA CGCGGCGGGC GATCTACCGC GGTCGTCTTC GACGCCTGCT CGCCGAGCGC
CCGAAGCGGC CGGATCTGCC GCGCGGATGG CGAATATCGA ACGCCACGAT GGAATTGCTC
ACCCAGCCCT GCGTCCCGTT TGCGGATGCC TGGCAACGAA TATCGAATGA CAGCCCGGCG
TTGCGTCGGG GCGCGCCGTT GCGCCCTTCC GATCTGCCAC GGCAGATCGC GATTGCAAGA
ATGGTTTTGC GGCAGCTCCG TCTTGAGGTC AGCGCGCCGA CAATCGCTCC AGCCGATATA
TCTCGTCACG CACGACGGTT CGAACCGGCA GCCGAGTGGC GACCGTGGTC GCGAATTGAT
CACTCGCGTC GCGTCCGGTC AGCGGATAAT CCGTCTCGCC CAGCCAATGG CACTGAATGA
 
Protein sequence
MKADRLAARG SAVVAIPAHD EAQRIHRCLS ALAMQRDEVG APIRAGAFEI LVFANNCTDA 
TPDVVRTFAA SVPHPILVIE AQLPPGQRSA GAARKHAMDL AAARLNERGA FDGVILTTDA
DSCVAPTWFA ATMRELQSGV DCVAGYIDAE PFEIVSLGDA FLARGRLEDT YLRLLAEIDA
RCDPRPHDPW PNHRVSSGAS LALTLAAYEA VGGLPPRPVG EDVALTAALE HFGFKVRHSM
AVSVSTSCRL DGRAQGGAAD TMRLRHAETN APCDDDLEPA LQATRRAIYR GRLRRLLAER
PKRPDLPRGW RISNATMELL TQPCVPFADA WQRISNDSPA LRRGAPLRPS DLPRQIAIAR
MVLRQLRLEV SAPTIAPADI SRHARRFEPA AEWRPWSRID HSRRVRSADN PSRPANGTE