| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_0477 |
|---|
| Symbol | |
|---|
| ID | 4020945 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007958 |
|---|
| Strand | - |
|---|
| Start bp | 551564 |
|---|
| End bp | 552052 |
|---|
| Gene Length | 489 bp |
|---|
| Protein Length | 162 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637960664 |
|---|
| Product | pyridoxamine 5'-phosphate oxidase-related, FMN-binding |
|---|
| Protein accession | YP_567616 |
|---|
| Protein GI | 91974957 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3871] Uncharacterized stress protein (general stress protein 26) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.130245 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.542758 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGGCAG ATACCAACCA GGGCGATGCG CAGCACGCCT GGGACCTGAT GAAGAAGATT
ACCTTCGCGA TGCTGGCGAC ACGGGACGGC GAAAAGCTTC GGTCCCGCCC AATGGCGGCC
TATATTCGCC CCGAGGAAGG CGCGATCTAT TTCCTGACTG ACGTTCGCCG GCACAAGGAC
GACGAGATCG CGCAGGATCA CCACGTCAAT CTCGGCTTTG CGGATTCGAG CGCGCAGAAA
TACGTTTCTG TGTCGGGCTA TGGCACCATC TCGAACGACC GCGCCAAGAT CAAGGAGCTG
TTCGGCACCG CCGCGAAAGC GTGGTGGGAC AGTCCCGACG ATCCGAACAT CCGCATTCTC
AAGGTCACCC CGGAAGAGGC CGAATACTGG GATTCGCCCG GCACCCTCGT CAGCTACGTG
AAGATGGCTG TGGCGGCCGC GACCGGCTCG CGTCCCGATC TGGGCGAGAA CCGCAAGGTC
GCAATCTGA
|
|---|
| Protein sequence | MAADTNQGDA QHAWDLMKKI TFAMLATRDG EKLRSRPMAA YIRPEEGAIY FLTDVRRHKD
DEIAQDHHVN LGFADSSAQK YVSVSGYGTI SNDRAKIKEL FGTAAKAWWD SPDDPNIRIL
KVTPEEAEYW DSPGTLVSYV KMAVAAATGS RPDLGENRKV AI
|
|---|
| |