Gene RPD_0324 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_0324 
Symbol 
ID4020783 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp377484 
End bp377993 
Gene Length510 bp 
Protein Length169 aa 
Translation table11 
GC content60% 
IMG OID637960502 
Productregulatory protein, MarR 
Protein accessionYP_567463 
Protein GI91974804 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCAGAA AGGCAAAGCT AGGTCTCGCG GTCCAATCGA TCGCGGTGGA CCCAAGCACC 
GTCGGGGAAT TCGTGACGGC AATCGGCAGT ATCGCCGTCT ATCTCGATGA AATCCGGCAG
TTTCGCGCCA AGAGCCTCGG CATCAGCGGG CCGCAATTCG CCATGCTGAC GACAATCCGG
GGGTTGGACG AGGGCGACGG CATCTCTGTG CGCCACGTCG CAAAGGCTAT CCACGTCGAT
TCCTCCTTCA TCACTACCCA ATCGAAGATT CTGGAGAAGA AGGGCCTGCT GCGTCGTCAG
ACCGACGAGA CCGACGCAAG GGTCGTGAAT CTGTCGTTGA CCGACAAGGC CTACAAGCAG
ATCGCGGGCC TTGCAGCGGA CGAGCAGTCG CTGAACGAGT TCATCTTCGC GGACCTCTCC
CGCGATGCGT TCGAAGGCGT CACGGCGCAA CTCACCGGGC TCAAAGCCCG TCTGGAGAAG
GCCTGCCTGA AGATTGCCGG GGGCTTTTAG
 
Protein sequence
MPRKAKLGLA VQSIAVDPST VGEFVTAIGS IAVYLDEIRQ FRAKSLGISG PQFAMLTTIR 
GLDEGDGISV RHVAKAIHVD SSFITTQSKI LEKKGLLRRQ TDETDARVVN LSLTDKAYKQ
IAGLAADEQS LNEFIFADLS RDAFEGVTAQ LTGLKARLEK ACLKIAGGF