| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_0193 |
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| Symbol | |
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| ID | 4020651 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 217997 |
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| End bp | 218977 |
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| Gene Length | 981 bp |
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| Protein Length | 326 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637960372 |
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| Product | signal peptide peptidase SppA, 36K type |
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| Protein accession | YP_567334 |
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| Protein GI | 91974675 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0616] Periplasmic serine proteases (ClpP class) |
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| TIGRFAM ID | [TIGR00706] signal peptide peptidase SppA, 36K type |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.116765 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGCTTG ATTCCGATGT GATCGTCGAT CGCCGCCGCA TCCGCCGCAA GCTGACGTTC
TGGCGGGTCG CTGCGGTGCT GGTGGCCATC GTCGCCGTGG TGGCGGTCGG CGCGATGGTG
TCGCCCGCCG GACAGGGCGG GCTCGCGACC TCCAGCTCGA TCGCGCGGAT CAAGATCGAC
GGCCTCATCC GCAGCAATTC GGAGCGGGTC GAGGCGCTGG AGCGGCTGGA GAAGTCGCAG
AGCGCCGCGG TGATCGTTCA CATCAATTCA CCGGGCGGCA CCACCGCAGG CTCGGAAGAA
CTCTACAACG CGCTGATGCG GCTGAAGGCC AAGAAGCCGA TGGTGGTCGT AGTCGAGGGC
CTGGCGGCTT CGGGCGGCTA CATCGCTGCG CTCGCCTCCG ATCACATCAT CGCCCAGCAG
AGCTCGCTGG TCGGCTCGAT CGGCGTGCTG TTCCAATATC CGAACGTCTC CGAGTTGATG
AAGACGGTCG GCGTCAAAGT CGAGGAAGTG AAATCGTCGC CGCTGAAGGC CGCGCCGAAC
GGATTCGAAC CGACCAGCCC CGAGGCGCGC GCCGCGCTGG AATCGCTGGT GCGGGATTCC
TACGCGTGGT TTCGCGACAT GGTGAAACAG CGCCGCAGCA TGGATGACAA TCAGCTCGGC
GTGGTCGCTG ACGGCCGCGT CTTCACCGGC CGTCAGGCGC TCGGCCTGAA GCTGATCGAC
GAACTCGGCG ACGAAAAGAC CGCGGTGGCG TGGCTGGAGA CCGAGAAGAA GATCAAGAGC
GGCTTGCCGG TGCGCGATTT CAAGCTGTCT CCGCAGTTCG GCGATCTGGC GTTCCTGCGG
GTGGCGGCGT CGGTGACGCT GGATGCACTC GGCTTGGGCG CGATCGCGCG GCAGATCGAG
CAATCGGGCG CGGTGCAGTC GGTCGAACGG CTTGGCCTCG ACGGCATGCT GGCGCTGTGG
GCGCCGGGCG GCTCGCGCTG A
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| Protein sequence | MSLDSDVIVD RRRIRRKLTF WRVAAVLVAI VAVVAVGAMV SPAGQGGLAT SSSIARIKID
GLIRSNSERV EALERLEKSQ SAAVIVHINS PGGTTAGSEE LYNALMRLKA KKPMVVVVEG
LAASGGYIAA LASDHIIAQQ SSLVGSIGVL FQYPNVSELM KTVGVKVEEV KSSPLKAAPN
GFEPTSPEAR AALESLVRDS YAWFRDMVKQ RRSMDDNQLG VVADGRVFTG RQALGLKLID
ELGDEKTAVA WLETEKKIKS GLPVRDFKLS PQFGDLAFLR VAASVTLDAL GLGAIARQIE
QSGAVQSVER LGLDGMLALW APGGSR
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