Gene RPD_0106 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_0106 
Symbol 
ID4020562 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp121596 
End bp121886 
Gene Length291 bp 
Protein Length96 aa 
Translation table11 
GC content64% 
IMG OID637960283 
Productglutaredoxin GrxC 
Protein accessionYP_567247 
Protein GI91974588 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0695] Glutaredoxin and related proteins 
TIGRFAM ID[TIGR02181] Glutaredoxin, GrxC family 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.926144 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGCTG CGATCGAAAT CTTCACGCGC CCCGGCTGCG GCTATTGCGG CGCCGCAAAG 
TCGCTGCTGA ACCGCAAAAA GGCGGCGTTC ACCGAGTACG ACGTCTCGGT CGATCCCGGC
TTCCGGGTGA AGATGGATGA GCGCGCCGGC CCCGGCGCCA CCTATCCGCA GATCTTCATC
GGCAGTTTTC ACGTCGGCGG CTGCGACGAC CTCTATGCGC TCGACCGCGA AGGCAAGCTC
GACGCGCTGT TGGCCGGCGA ACTTGCGGCC GGTGAAAAGG CCATCTCATG A
 
Protein sequence
MSAAIEIFTR PGCGYCGAAK SLLNRKKAAF TEYDVSVDPG FRVKMDERAG PGATYPQIFI 
GSFHVGGCDD LYALDREGKL DALLAGELAA GEKAIS