| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_4861 |
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| Symbol | |
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| ID | 3973604 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 5425343 |
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| End bp | 5427859 |
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| Gene Length | 2517 bp |
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| Protein Length | 838 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637927973 |
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| Product | glycogen/starch/alpha-glucan phosphorylase |
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| Protein accession | YP_534702 |
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| Protein GI | 90426332 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0058] Glucan phosphorylase |
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| TIGRFAM ID | [TIGR02093] glycogen/starch/alpha-glucan phosphorylases |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.293073 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCCAATTC AAACGATCAC CGACGACTTC CGCCCGCCGC AGCCGCCGCT TGACGAGCTG
GCTTTGGCCG AAATCAAGAG CGCCATCGTC GCCAAGCTCA CGCTGGCGAT CGGCAAGGAA
GCCGCGCTTG CCACCAAGCA CGACTGGTAC AAGGCCGCGG CCTTGGCGCT GCGCGACCGC
ATCGTGCATC GCTGGCTGGT TTCCGAAAAG GACAGCTACG ACGCCGGCCG CAAGCGGGTC
TACTACCTGT CGCTGGAATT CCTGATCGGC CGGCTGTTCA CCGACGCGCT GAACAATATG
GGCCTGCTGC CGCTGTTCGA CGCGGCACTC GGCGATCTCG GCGTCGGCCT GTCGGAGCTG
CGCAAATGCG AGCCCGACGC GGCGCTCGGC AATGGCGGCC TCGGCCGGCT CGCCGCCTGC
TTCATGGAAA GCATGGCGAC GCTGGAGATC CCGGCATTCG GTTACGGCAT CCGCTACGAT
TTTGGCCTGT TCCGCCAGAT CATCACCCAG GGCTGGCAGC AGGAATATCC CGACGAATGG
CTGGGCTTCG GCAATCCCTG GGAATTGCAG CGGCCGGAAG TCGTCTATCA GGTGCATTTC
GGCGGCAGCG TCGAACATTC GGTGGATTCC CGCGGCCATG ATCGCGCGAT CTGGTATCCG
GGTGAGACGG TGCAGGCGGT GGCCTACGAC ACCCCGATCG TCGGCTGGCG CGGCAAGCAC
GTCAACGCGC TGCGGCTATG GTCGGCAAGG GCGCCGGATC CGCTATTGAT CGACGTGTTC
AACTCGGGCG ACTATCTCGG CGCCACGGCG CACGAGGCGC GCGCCGAGGC GATCTGCAAA
TTCCTCTATC CCAACGACGA AAGCGCGGCG GGCCGCGAAT TGCGGCTGCG GCAGGAGTAC
TTCTTCGTCT CGGCCTCGCT GCAGGATCTG ATCAAGCGGC ATCTGCACGC CGAAGGCCAG
TTGCGCAACC TGGCGAAAAA GGCGGCGGTG CAGCTCAACG ACACCCATCC GAGCCTCGCC
GTCACCGAAT TGATGCGGAT CCTGATCGAT CACCACGGCA TGCGCTGGGA CGAGGCCTGG
GAAATCACCC GGGCGACGCT GTCCTATACC AACCACACGC TGCTGCCGGA GGCGCTGGAA
ACCTGGCCGG TCGAATTGTT CGAGCGCTGC CTGCCGCGCC ATCTGGAGAT CATCTATCGC
ATCAACGAAG TGCATTTGGG TCTCGCCAAT GCCTGCTGCC CCGGCGACGT CGATTTCCGC
GCCTCGGTGT CGCTGATCGA CGAAAAAGCC GGCCGGCGGG TGCGGATGGG CCACCTGGCG
TTCATCGGCT CGCACCGCAT CAACGGTGTC TCGGCGATGC ATTCCGATCT GATGAAAGAG
ACGGTGTTTC ACGACCTGCA CCATCTCTAT CCCGGCCGCA TCACCAACAA GACCAACGGC
ATCACCTTTC GCCGCTGGCT GATGCTGGCC AATCCGGGGC TCACCGACCT GGCGCGCGCC
ACCTGCGGCG AGGAGGTGCT CGACGATCCG ACCCGTCTGC AACGGATGGA GGACTACGCC
GGCGACAGTG CGTTCCAGCA GCAGTTCCGC GCCGTCAAGC ATCGCAACAA AGTGGCGCTG
TCGCGTTTGA TCGCCGACCG CCTGGAGATC AAGGTCGATC CCAGCGCGCT GTTCGACGTG
CAGATCAAGC GGATTCACGA ATACAAGCGC CAGCTGCTCA ACGTGCTGGA GACCATCGCG
CTGTACTACG CGATCAAGGA CGAGCCGCAG CGCGACTGGG TGCCGCGGGT CAAGATCTTC
GCCGGCAAGG CGGCGGCGAG CTATCGCTAC GCCAAATTGA TCATCAAGCT GATCAATGAC
GTCGCCGAGA CCATCAACAA CGATCCCGAA ATCGCCGGGC GGCTCAAGGT GGTGTTCCTA
TCGGACTACA ATGTCAGCCT CGCCGAGGTG ATCATTCCCG CCGCCGATCT GTCCGAGCAG
ATTTCGACCG CCGGGATGGA GGCCTCCGGG ACCGGCAACA TGAAGCTCGG TCTCAACGGC
GCGCTCACCA TCGGCACGCT GGACGGCGCC AATATCGAGA TGCGTGACCA CGTCGGCGCG
GAAAACATCG CGATCTTCGG CATGGAAGCC CTCGAAGTGG TGGCGCGCCG GTCGCAAGGC
CTCGACGCCA CCGACGTGAT CGGGCGTTCG CCGCATCTGG CGCGGGCGAT CCGCGCGATC
GATTCCGGGG TGTTCTCGCC GGACGACGTC GGCCGCTTCG CTTCGATCGC ACACGCGCTG
CGCCACCTCG ACCACTACAT GGTCAGCGCT GATTTCGACT CCTACTACGA AGCCCAGCGC
GGCATCGACG CGCGCTGGCG CGCGGGGCCG GCCTGGACCC GGGCGGCGAT TCTCAACGTG
TCGCGGATGG CGTGGTTCTC CTCGGACCGC ACGATTCGCG AATACGCCGA GGACGTTTGG
GACGTACCGA CCACGCCCGC CGCGCAACCT TCGGAGGCCC GCCAGGCGCA GCGGTAG
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| Protein sequence | MPIQTITDDF RPPQPPLDEL ALAEIKSAIV AKLTLAIGKE AALATKHDWY KAAALALRDR
IVHRWLVSEK DSYDAGRKRV YYLSLEFLIG RLFTDALNNM GLLPLFDAAL GDLGVGLSEL
RKCEPDAALG NGGLGRLAAC FMESMATLEI PAFGYGIRYD FGLFRQIITQ GWQQEYPDEW
LGFGNPWELQ RPEVVYQVHF GGSVEHSVDS RGHDRAIWYP GETVQAVAYD TPIVGWRGKH
VNALRLWSAR APDPLLIDVF NSGDYLGATA HEARAEAICK FLYPNDESAA GRELRLRQEY
FFVSASLQDL IKRHLHAEGQ LRNLAKKAAV QLNDTHPSLA VTELMRILID HHGMRWDEAW
EITRATLSYT NHTLLPEALE TWPVELFERC LPRHLEIIYR INEVHLGLAN ACCPGDVDFR
ASVSLIDEKA GRRVRMGHLA FIGSHRINGV SAMHSDLMKE TVFHDLHHLY PGRITNKTNG
ITFRRWLMLA NPGLTDLARA TCGEEVLDDP TRLQRMEDYA GDSAFQQQFR AVKHRNKVAL
SRLIADRLEI KVDPSALFDV QIKRIHEYKR QLLNVLETIA LYYAIKDEPQ RDWVPRVKIF
AGKAAASYRY AKLIIKLIND VAETINNDPE IAGRLKVVFL SDYNVSLAEV IIPAADLSEQ
ISTAGMEASG TGNMKLGLNG ALTIGTLDGA NIEMRDHVGA ENIAIFGMEA LEVVARRSQG
LDATDVIGRS PHLARAIRAI DSGVFSPDDV GRFASIAHAL RHLDHYMVSA DFDSYYEAQR
GIDARWRAGP AWTRAAILNV SRMAWFSSDR TIREYAEDVW DVPTTPAAQP SEARQAQR
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