Gene RPC_4651 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_4651 
Symbol 
ID3972240 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp5201266 
End bp5202255 
Gene Length990 bp 
Protein Length329 aa 
Translation table11 
GC content68% 
IMG OID637927763 
ProductCHAD 
Protein accessionYP_534492 
Protein GI90426122 
COG category[S] Function unknown 
COG ID[COG5607] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.879641 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTAAGG CGACCGTAGG CCGTGCACCC AAATCCAACG GCAGGGTTGC GCCCCGCCGT 
GCGGCCGTGG TGTTCAAATC GAGCGAGGCC AGCAAGGCCG AGAAGATTGT GCTGCCGCGC
GGCATCGCCA CGGTCGATGC CTTTCGCATG ATCGCGAGGT CGGTGCTGCG CCACGTCGTC
GGCAACGAGG CCGCGGTGCG CGTCGCCAAT CCCGATGGCG TGCACCAGAT GCGGATCGGG
CTGCGGCGGC TGCGCGCCGC CATCGCGACG TTCGGCGAAT TGTTGCAGGA CGCCGAAACC
GAGCGGCTCA AGCGCGAGTT GAAATGGCTG ACCGGCCGGC TGGGGCCGGC GCGCGACCTG
CATCTGCTGG AACTGCGGAT CAAGCGCCAG CGCACGGCGG ATCGCGCCGA ATGGCTCGCC
GAGATCGCCG CGCGGCGGAG CCGGGCGTTC GCCGGGGCCA AGGCGGCGAT GCAGTCGGCG
CGTTACCGCG CCTTGCTGCA CGACATCCGG CACTGGATCG AGGCCGGGCC GTGGGCGGAG
CGGCCAACGC TGAGGCCGGC GCACCGAGAA GCCGTGGACT TCGCCGCTGA TGTGGTGGCG
CGGCGCGCCC GCAAAGTAAT GCGCAAGGCC GAACGGCTGC ACGACCTCAA TGTGGAGCAG
CGCCACCGGC TGCGGATTTC AGCCAAGAAG CTGTACTACG CGATCGGCTT CTTCGAGACG
CTGTTCGAGG GCCGCAAGGC GCGCGATCGG TTGGGCACGT TCCAGTCGAC GTTGAAGGAA
TTGCTGGATC GGTTGGGGGC GCTGAACGAT ATTGCCGTGC AGCAGCGGTT GGCGATTTCG
GTGGCGGCGC CGAACGGCAA GCGCCCGCAT GGCGCCGCGA CGCAGCTGCC GCCACCACCG
CCGCGCGATC GCATCAAGAT CGATCATTTG CTGCAATCCG CCGTCGCGAC CGGCGCCGAA
CTCGCAACCG CCAAGCGATT CTGGGATTGA
 
Protein sequence
MAKATVGRAP KSNGRVAPRR AAVVFKSSEA SKAEKIVLPR GIATVDAFRM IARSVLRHVV 
GNEAAVRVAN PDGVHQMRIG LRRLRAAIAT FGELLQDAET ERLKRELKWL TGRLGPARDL
HLLELRIKRQ RTADRAEWLA EIAARRSRAF AGAKAAMQSA RYRALLHDIR HWIEAGPWAE
RPTLRPAHRE AVDFAADVVA RRARKVMRKA ERLHDLNVEQ RHRLRISAKK LYYAIGFFET
LFEGRKARDR LGTFQSTLKE LLDRLGALND IAVQQRLAIS VAAPNGKRPH GAATQLPPPP
PRDRIKIDHL LQSAVATGAE LATAKRFWD