| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_4522 |
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| Symbol | |
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| ID | 3972300 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 5046242 |
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| End bp | 5047531 |
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| Gene Length | 1290 bp |
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| Protein Length | 429 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637927632 |
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| Product | phage integrase |
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| Protein accession | YP_534363 |
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| Protein GI | 90425993 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0582] Integrase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.292224 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGCGGG GATTCGGAAA ACTGACCGTC AAAACGGTCG AGCATTTGTC TCGGCGAGGA
ATGCACGCTG ACGGCGGCGG GCTTTATCTG CAGATCGCCG AGGGCGGCTC AAAAAGCTGG
CTGTTTCGAT ACAAGCTCCA CGGCCGCACA CATTGGCATG GCTTGGGTTC GCTGCGTGAC
GTGGGCCTTG AAGAGGCGCG AGAGAAGGCG ACCGGAGCGC GCAAGGTCCG CCGCAATGGC
GGCGACCCCA TCCAGGCAAA GCGCCAAGCG GAAGCCGCCG CCCGCATCGA AGCGGCCAAG
GCGATCACGT TCGGAGAGGC GGCCAAGCGG TTCATCAAAG CCAATCGGTC AGGCTGGAAA
AACGCCAAGC ACGCCGACCA ATGGGTGATG ACGTTGCTCG GCATCGACCA GAAGGGCAAG
CCGAGCAAGA ACGACTACTG CAAGACCATC CGTGATCTTC CCATCGGCGC GATTGATACG
ACGCTGGTCC TGCGGATCAT CGAGCCGATC TGGGCGAGCA AGACCGAAAC GGCCACCCGT
ATTCGCAGTC GCATCGAGTT GGTGATCGAC GCCGCCAAGG CGAAGGGCGA GTTCAACGGC
GAAAACCCGG CACGTTGGAA GGGGCATCTC GATAACCTGC TCCCAGCCAC CTCGAAGGTT
CGCAAGGTCC GCAATCATCC GGCGCTGCCT TACAGACAAT TGCCCGACTT CATGCGCAAG
CTCCGCGAGC GTGACGGTGC CGCTGCGGCG GCTCTTGAGT TTCAAATCTT GACGGCCGTC
AGGCCGGGCA ACGCAGTAGC GGCAAAATGG GACCAGATCG ATCGGCGGAC ATCAGTCTGG
ACCATTCCGT CCGCACTCAT GAAGAGCGAT GCCGAACACA GAGTGCCATT GAGCAAGGCA
GCGCTCGCCG TGCTTGATCG CATGGAAGCC ACGAAGGATG ACAGCGAGTA CATCTTCCCC
AACACCAAGG GCAAGCCGCT GAGTGACGCT TCGATGGCCG CGGTGATCGA CAGGATGAAT
GAGCTGAAGC GGCACTGGAT CGATCCCAAG CTTGACCGCG GAATCGTTCC TCACGGATTC
AGGTCGTCGT TCCGCGATTG GGCTGCAGAG CACGGCTATG ACGATCCCGT CGCCGAAGCT
GCGCTCGCGC ACAAGGTCAG CGACGAAGTG GTCGCGGCCT ATCGGCGCAC GACGTTCCTC
GACCTGCGCA ACCGGATGAT GGAGGACTGG GCCGACTATT GCGCCCGACC TTTCAGCAGC
GGTGACATCG TCGTGGCGTT CCGGGCGTAG
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| Protein sequence | MARGFGKLTV KTVEHLSRRG MHADGGGLYL QIAEGGSKSW LFRYKLHGRT HWHGLGSLRD
VGLEEAREKA TGARKVRRNG GDPIQAKRQA EAAARIEAAK AITFGEAAKR FIKANRSGWK
NAKHADQWVM TLLGIDQKGK PSKNDYCKTI RDLPIGAIDT TLVLRIIEPI WASKTETATR
IRSRIELVID AAKAKGEFNG ENPARWKGHL DNLLPATSKV RKVRNHPALP YRQLPDFMRK
LRERDGAAAA ALEFQILTAV RPGNAVAAKW DQIDRRTSVW TIPSALMKSD AEHRVPLSKA
ALAVLDRMEA TKDDSEYIFP NTKGKPLSDA SMAAVIDRMN ELKRHWIDPK LDRGIVPHGF
RSSFRDWAAE HGYDDPVAEA ALAHKVSDEV VAAYRRTTFL DLRNRMMEDW ADYCARPFSS
GDIVVAFRA
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