| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_4507 |
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| Symbol | |
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| ID | 3972285 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 5021283 |
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| End bp | 5021705 |
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| Gene Length | 423 bp |
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| Protein Length | 140 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 637927618 |
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| Product | transposase IS200-like |
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| Protein accession | YP_534349 |
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| Protein GI | 90425979 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1943] Transposase and inactivated derivatives |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.0472211 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGACGAGT ACGAGAGCCT AAGCCACAGC AAATGGGAGT GCAAATATCA TGTTGTGTTC
ATTCCCAAAT GCCGGAGAAA GACGCTTTAT GGGGAGTTGC GACGTCACCT TGGGGAGTTG
TTTCGCAAGC TGGCGCAGCA GAAGGAAAGC CGGATCCAAG AAGGTCACTT GATGCCGGAC
CATGTCCACA TGATGATTTC GATTCCACCG AAATATGCGG TGTCGCAGGT GGTCGGGTTT
ATCAAGGGCA AGAGTGCCAT CCACCTGGCC CGTGTCTATG GAGAGAAGAA GCGCAATTTT
GTAGGGCAGC ACTTCTGGGC GAGAGGGTAC TTCGTCTCGA CCATAGGTCG GGACGAAGCG
GTGATCCGGG AGTACATCAG ACAGGAGGAC AGGCGCCTGG AGCAATTGAA TTTGTGGCGT
TGA
|
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| Protein sequence | MDEYESLSHS KWECKYHVVF IPKCRRKTLY GELRRHLGEL FRKLAQQKES RIQEGHLMPD
HVHMMISIPP KYAVSQVVGF IKGKSAIHLA RVYGEKKRNF VGQHFWARGY FVSTIGRDEA
VIREYIRQED RRLEQLNLWR
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