Gene RPC_4256 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_4256 
Symbol 
ID3972908 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp4739331 
End bp4740197 
Gene Length867 bp 
Protein Length288 aa 
Translation table11 
GC content72% 
IMG OID637927360 
Productperiplasmic binding protein 
Protein accessionYP_534099 
Protein GI90425729 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.527831 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCGGCA CGATGAGGCG ATGTCTCGCC CGATCCGGCT GGCTCGCCCG CGCAGGCGGC 
GTGCTGGCCT TGGCGACCCT GGCGACGGGC GCCCTCGCCG GCCCGGCACG GATCGCCTCG
ATCAACATGT GCACCGATCA ATTGCTGCTG GCGCTCGCCG ATCCCGAGCA GATCGCGGGC
CTTGGCCCCT ATGCGCGCGA CCCGCGGCTG TCGTGGTCTG CGACCGAGGC GCTGCGCTAT
CCGCGGCTGT CCGGCGAGGC CGAGGATCTG TTGATGCTGC AGCCCGACCT GGTGCTGGCC
GGCCGCTACG GCAAGCGCGC CACCCGCGAC CTGCTGCGCG CCAAAGCCGT GCCGGTCGCC
GAATTCGACG TGCCGCGCAG CATCGACGAC GTCAAAAGCC AGATCCGCCG CGCCGGCGAT
CTGGTCGGCC ACACCGATCG CGCCGAGGCG CTGATCGCGA AGATCGACGA AGCTTTGAGC
CGCACGCGGG CAGCGGCCTC GCGCCGCCAC GACCGCGTGC TGACGGTGTC GCGGCGCGGC
TGGGTCTCGG GCAGCGACAG CCTGACCAGT TCGCTGCTGG CGGCCGCCGG GCTGTCCAAT
GCGGCCGCCG AGCTCGGACT GCCGCATGGC GGCTTCGCCG CGCTGGAGAC CATCGTCGCG
TCAAAGCCGG ATCTGATCCT GATCGCCGAA GCCGATCCGG CCGCGGAGGA TCAGGGCAAG
GCGTTGCTGC TGCATCCGGC GATCCAGCGC GCCTACCCGC CCGACAAGCG GCTGGTGATC
GCCGAACAAC TGACGATGTG CGGCGGGCCG ATGCTGCCCG CCGCGCTCGA CCGCCTCACC
GCCGCGCTGG ACCGCATCGG TCACTGA
 
Protein sequence
MGGTMRRCLA RSGWLARAGG VLALATLATG ALAGPARIAS INMCTDQLLL ALADPEQIAG 
LGPYARDPRL SWSATEALRY PRLSGEAEDL LMLQPDLVLA GRYGKRATRD LLRAKAVPVA
EFDVPRSIDD VKSQIRRAGD LVGHTDRAEA LIAKIDEALS RTRAAASRRH DRVLTVSRRG
WVSGSDSLTS SLLAAAGLSN AAAELGLPHG GFAALETIVA SKPDLILIAE ADPAAEDQGK
ALLLHPAIQR AYPPDKRLVI AEQLTMCGGP MLPAALDRLT AALDRIGH