Gene RPC_3853 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_3853 
Symbol 
ID3969120 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp4280722 
End bp4280991 
Gene Length270 bp 
Protein Length89 aa 
Translation table11 
GC content59% 
IMG OID637926963 
Productputative monovalent cation/H+ antiporter subunit F 
Protein accessionYP_533705 
Protein GI90425335 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2212] Multisubunit Na+/H+ antiporter, MnhF subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGGGA CCGCGTGCCT CATCGCCCTC GTTGCGATTA GCGTTTCGGC GCTGCTCAAC 
CTCTACCGGC TCGGCGCCGG CCCCGACGTG CTCGACCGGA TTCTGTCGCT GGAAACCTTG
GTGATCAATG CCATCGGGCT GGTCGTGGTG ATTGGCATCT GGTTCAACAC CAGCCTGTAT
TTCGAGGTCG CCTTGCTGCT CGTGGCTGTC GGCTTCCTTT CGACGGTGGC GTTCTGTAAA
TATCTGTTGC GCGGCAATGT GATCGAATAG
 
Protein sequence
MIGTACLIAL VAISVSALLN LYRLGAGPDV LDRILSLETL VINAIGLVVV IGIWFNTSLY 
FEVALLLVAV GFLSTVAFCK YLLRGNVIE