Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_3624 |
Symbol | |
ID | 3971652 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | + |
Start bp | 4029369 |
End bp | 4029926 |
Gene Length | 558 bp |
Protein Length | 185 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637926732 |
Product | hypothetical protein |
Protein accession | YP_533478 |
Protein GI | 90425108 |
COG category | [S] Function unknown |
COG ID | [COG3652] Predicted outer membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.018546 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGAAGC ATTTGACCGT TCTGGCCACC TGCCTGCTGT TCGCCACCCC GGCGCTGGCG CAGTCGGTCG GCGAGAAGAC CGGCGTGAAC TCCACGCTCG GCATCGCGCC CGCCACCCAG GACTTCGTTA CCCAGGCGGC GATCAGCGAT CTGTTCGAGA CCGGCTCCGC CAAATTGGCG CTGGCCAACG GCAACGACGC GGTGAAGAAG TTCGCCAATC AGATGATCGA AGATCACTCC AAGACTTCGG CCGAGCTGAA GCGGCTCGCC ACCGGAACGC TCAAGGCGGA GCTGCCGAGC CAACTCGACA GCGCGCATCA GAGCAAGCTC GACAAGCTGA ATCAGGCCCG CGGCGAGGAA TTTTCCACGC TGTATGCCTC CCAGCAGGTC GACGCTCATA AGGACGCGGT GAATCTGTTC GAGCGTTATT CGAAGGGCGG CGACAACGCC GAGTTGAAGA ATTGGGCCGG CAAGACCCTG CCCACCCTGC AGCATCATTT GGAGATGGCG CAAAAGCTCG ACGATTCCCG CTCCGGCACT ACCGTCGGCA AGAAGTAA
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Protein sequence | MKKHLTVLAT CLLFATPALA QSVGEKTGVN STLGIAPATQ DFVTQAAISD LFETGSAKLA LANGNDAVKK FANQMIEDHS KTSAELKRLA TGTLKAELPS QLDSAHQSKL DKLNQARGEE FSTLYASQQV DAHKDAVNLF ERYSKGGDNA ELKNWAGKTL PTLQHHLEMA QKLDDSRSGT TVGKK
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