| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_3537 |
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| Symbol | |
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| ID | 3973944 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 3929976 |
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| End bp | 3930713 |
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| Gene Length | 738 bp |
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| Protein Length | 245 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637926648 |
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| Product | conjugal transfer protein TrbJ |
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| Protein accession | YP_533395 |
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| Protein GI | 90425025 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG5314] Conjugal transfer/entry exclusion protein |
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| TIGRFAM ID | [TIGR02780] P-type conjugative transfer protein TrbJ |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTAGGC TCCGTCATCT GGCGGCGGCA AGCGCCGTCG CGCTGTCGCT CATCGTCGGC
GCGCCACCAC TCGCGGCGCA GTGGGTCGTG TTCGACCCCA ACAACTATGC GCAGAATGTT
CTGACCGCCG CGCGCGAGCT GCAACAGATC AACAACCAGA TCACGTCGTT ACAAAATCAG
GCGCAGATGC TGATCAGCCA GGCGCGCAAT CTTGCGAGCC TGCCATATTC CTCGCTGCAG
CAGCTGGAAT CCTCGATCCA GCGCACCCAG CAGCTTCTCG CGCAGGCGCA GAACATTGCC
TTCAACGTCC AGCAGATCGA TCATGCCTTT CAGACCACCT ATGGCAGCGC CAATGCGAGC
CAATCCAGCC AGGCGCTGAT CGGCAACGCC CAGGCGCGTT GGCAGAACTC GGTCGCGGCG
CTGCAGGACG CGCTGCGGGT GCAGGCCGGC GTGGTCGGCA ATCTCGACAC CAACCGCACC
CAGATGTCGG CCTTGGTGAC CTCGAGCCAG GCGGCAACCG GCGGACTTCA GGCCACCCAA
GCAGGCAACC AGCTCCTCGC GCTTCAGGCA CAGCAACTCG CCGATCTCAC CGCGGCCGTG
GCGGCTCAGG GCCGCGCGCA GTCGCTTCAG GCGGCCCAGC AGGCCGCGGC GCAAGATCAG
GCCAGGGAAC AGCTCCGCCG CTTCCTCAGC CCCGGCAACG GTTATCAGCC CTCCAACGTG
GCGATGTTTC ATCAATGA
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| Protein sequence | MIRLRHLAAA SAVALSLIVG APPLAAQWVV FDPNNYAQNV LTAARELQQI NNQITSLQNQ
AQMLISQARN LASLPYSSLQ QLESSIQRTQ QLLAQAQNIA FNVQQIDHAF QTTYGSANAS
QSSQALIGNA QARWQNSVAA LQDALRVQAG VVGNLDTNRT QMSALVTSSQ AATGGLQATQ
AGNQLLALQA QQLADLTAAV AAQGRAQSLQ AAQQAAAQDQ AREQLRRFLS PGNGYQPSNV
AMFHQ
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