| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_3384 |
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| Symbol | |
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| ID | 3970486 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 3764692 |
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| End bp | 3767388 |
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| Gene Length | 2697 bp |
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| Protein Length | 898 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637926495 |
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| Product | multi-sensor signal transduction histidine kinase |
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| Protein accession | YP_533243 |
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| Protein GI | 90424873 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCATCGG TCATCGCAGC GTATCTGAAG CGGGCAAAGA CGGTTTCGCT TTCGATCCGT
CAGTTGACCT TTGGCAGCTT TCTGCTGCTG CTGGCGATCA TCGTGGCGAC CTCGATCGCC
AGCGTGGTGG CGCTGCGGCA CATCGACGCC ACCTTCGGCG AGTTGCAAAG GCTGCAAAGC
GTCGACGATC TCGCCGAGGA GATCGAGCGC AAGATGAGCG AAGTGCGGCT CGCGGCGCGC
GACTTCGTCA CCGATCCGGG CGGCCAGCCG GGCCGGGTCT GGGAGGCCAC CTCGGCGCTC
AATGCGCTGT TGAAAAAGAC CCGGCTGGAA CTGGCGCCGG ATCAGCAGCA GATGATCGAC
GGGGTCGCGG CGCGGCTGAC CAAATATCGC GAGGGCATCG AGCGCATCAC CGCGCTGATC
CCGCGCCGAG CCGAACTGAT TGCCTCGGTG CCGCCGTTGC GCGATCAATT CGAGGCAGCC
GTCGATGCGC TGCCGGATCG CGCCGTGGCG GCCAGTCTGT ATCGCGAGCG CAGCCGGATC
GCGGCGGCGC TGTTGTCCAA CGATCTGGAC GGCGCCGAAC GGGCGGCCGT GAAGCTACGC
AGCCTGACCG AAGCGTCGCC GGCGCTGCGC GGCGCGACGT TGGACTATTC GGATACGATC
GTCTCGCTGG CGGGGGTGGA ACGCGAGATC GTCGAACTCG ACAAACAGGT GCTCGGCGCC
GAAGGCCGGC AGATCGGCCG GGTCACCGAT CTGTTGCGCG ATCTCACCGC GCGCCGCGGC
CGGGTGCTGT CGAAGGATTT CGCCAGGACG TTGGCGGAGG ACAAATGGCA GAGCATCGTG
TTCGGCACCG CCGGCGTGCT GCTCGGCATC TTCGCGGCCG CCTATGTGGT GCGGCGCACG
GTCGGACCGC TGGCGGCGAT CGCCGCGGCG ATCCGTGCGC TGGCGGCCGG CGAGAAATAC
ACCGCGATTC CGGCCGTCGA GGTCGAGAAC GAGATCGGCG ACATCGCGCG CGCCGCCGAG
GTGTTCCGCA AAACCCTGGT CGACGCCGAC GCCGCGCGCG AGGCGGCGCT GCACGCGCTC
GCCGAGCAGC GCCACGCCGA GGAAAGCTAT CGCAAACTGT TCGAGGGCTC GATCGACGGC
ATCTACGTCA CCACGCCGGA GGGCGCGCTC GTCAACGCCA ATCCGGCGTT GGCGCGGATG
ATGGGCTACG ACACGCCCGG CGAACTGATC GCCCGGATCG GCGACATCGC CAACACCATC
TACGTCAACC CGGCGACGCG CGGGCACTAT CGGCAGATCA TGGACCGCGA CGGCTTCGTG
CGCGAATTCG AATATCAGGC GCGGCGCCGC GACGGCGAGA TCCTGTGGCT GTCGGACAGC
GCCAGCACGG TGCGCGACGC CGACGGCCGC GTGCTGCGCT ACGAAGGCGC GGTGCGCGAC
ATCACCGATC AGAAGCGCGC CGAACACGCG GTGGCCGAAG GCCGCCGGCT ATTGCAGCAG
GTGATCGATA CCGTGCCGGC GGTGATCAAC GTCAAGGACA CCGAGCTGCG CTACGTGCTG
ATGAATCGCT ACATGGCGGG GGTGTTCGGC ATCGAGGCGC AGGACGCCAT CGGCCGCACC
ACCGCCGATC TGATGGCGCG CTACGGCGAG CGGAAAACCG ACGCGAACGA CAAGCGCGTG
CTGGCGACCG GCGAGGGGCT CGGATTCTAC GAGGAGGACT ATGTCGATTG CAGCGGCGTG
ATGCGGCAAT GGCTGGTCAA CAAGCTGCCG CTGTTGGATT TTCGCGGCGA TGTCGAGCGC
ATCGTCACCG TGGCGCTCGA CATCGGCGAC CGCAAACGCG GCGAGCTGGA AATGCGCAAG
GCCAAGGATG CCGCCGAGGC CGCGCTGAAG AACCTCAAGG AAACTCAGAA CTCGCTGATC
GAAGCCGAAA AGCTCGCGGC GCTCGGCCGG CTGGTCGCCG GCGTCGCCCA CGAGGTCAAC
AATCCGGTCG GCATCAGCCT CACCGTCGCT TCGTCTCTGG AGCGCAAGAC CGCGCAGTTC
GCCGCCGAGG TCGAGCGCGG CAATTTGCGA CGCTCCAGCC TCAGCGATTT TCTCGAGACC
AGCCGCGACG CCGCGACGCA GCTAATCGCC AACCTCAATC GCGCGGCCGA ACTGGTGCAG
TCGTTCAAGC AGGTCGCCGC CGATCGCAAC TATTCCGACC AGCGGGTGTT CGATCTCGCC
GACCTCACCG AGCAGGTGGT GATGAGCCTC AAGGCGGGCC TGCGAAAACA GAATCTGGCG
CTTTCGGTGG ACTGCGAACC GAACCTCGCC ATGAACAGCT TCCCCGGCCC TTACGGGCAG
GTGCTGACCA ACCTGTTCTT CAATTCGATT TCGCACGCCT TTCCGAACGG CGACGGCGGC
AAGGTCGCCA TCAGGGTGCA GGAATCCGGC GACGATCACG TCGAAATTCT GTTCGCCGAC
GACGGCTGCG GCATGACGCA CGAGGTCCGG CGTCGCGCCT TCGATCCGTT CTTCACCACG
CGGCGCGATC AGGGCGGCAC TGGGCTCGGC TTGCACATCG TCTACAGCAT CGTCACCAAT
CGGCTGGGCG GCCGCATCAG CCTGAATTCC GAGCCGGGCG CCGGCACCGA GGTGCGAATC
GTGTTGCCAC GGGTGGCGCC GCAAGAGCTC TCCAGCGAAG CTCGCGCGGC AACCTGA
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| Protein sequence | MASVIAAYLK RAKTVSLSIR QLTFGSFLLL LAIIVATSIA SVVALRHIDA TFGELQRLQS
VDDLAEEIER KMSEVRLAAR DFVTDPGGQP GRVWEATSAL NALLKKTRLE LAPDQQQMID
GVAARLTKYR EGIERITALI PRRAELIASV PPLRDQFEAA VDALPDRAVA ASLYRERSRI
AAALLSNDLD GAERAAVKLR SLTEASPALR GATLDYSDTI VSLAGVEREI VELDKQVLGA
EGRQIGRVTD LLRDLTARRG RVLSKDFART LAEDKWQSIV FGTAGVLLGI FAAAYVVRRT
VGPLAAIAAA IRALAAGEKY TAIPAVEVEN EIGDIARAAE VFRKTLVDAD AAREAALHAL
AEQRHAEESY RKLFEGSIDG IYVTTPEGAL VNANPALARM MGYDTPGELI ARIGDIANTI
YVNPATRGHY RQIMDRDGFV REFEYQARRR DGEILWLSDS ASTVRDADGR VLRYEGAVRD
ITDQKRAEHA VAEGRRLLQQ VIDTVPAVIN VKDTELRYVL MNRYMAGVFG IEAQDAIGRT
TADLMARYGE RKTDANDKRV LATGEGLGFY EEDYVDCSGV MRQWLVNKLP LLDFRGDVER
IVTVALDIGD RKRGELEMRK AKDAAEAALK NLKETQNSLI EAEKLAALGR LVAGVAHEVN
NPVGISLTVA SSLERKTAQF AAEVERGNLR RSSLSDFLET SRDAATQLIA NLNRAAELVQ
SFKQVAADRN YSDQRVFDLA DLTEQVVMSL KAGLRKQNLA LSVDCEPNLA MNSFPGPYGQ
VLTNLFFNSI SHAFPNGDGG KVAIRVQESG DDHVEILFAD DGCGMTHEVR RRAFDPFFTT
RRDQGGTGLG LHIVYSIVTN RLGGRISLNS EPGAGTEVRI VLPRVAPQEL SSEARAAT
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