Gene RPC_3082 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_3082 
Symbol 
ID3972903 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp3419957 
End bp3421057 
Gene Length1101 bp 
Protein Length366 aa 
Translation table11 
GC content70% 
IMG OID637926190 
ProductPpx/GppA phosphatase 
Protein accessionYP_532943 
Protein GI90424573 
COG category[F] Nucleotide transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0248] Exopolyphosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.417724 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0483754 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGGACG ACACGCGGCT TCGCGACGGC CTTGAGCCGC GTGAGGAGCC GCAAGCTGCG 
AATGCTGTGG AGCGCGTCGG CGTTGCGGTC GACCCGGCCG ACGGCTCGCG CGTGGCCGAT
GGTTCGCACA CCCATGACGG GGTGTACGCC GCGATCGACC TCGGCACCAA CAATTGCCGG
CTGTTGATCG CGCGGCCGAC CGGCGACGGC TTCCGGGTGA TCGATTCGTT CTCGCGGATC
ATCCGGCTCG GCGAGGGCAT GGCCGCCAGC GGCCGGATCA GCGAAGCGGC GATCGGCCGG
GCGGTCTCGG CGCTGACGGT GTGCAGCGAC AAAATCCACG CCCGCAAGGC CACCCGGCGG
CGGCTGATCG CGACCGAAGC CTGCCGCGCC GCCGCCAATG CCGACGAATT CCTCGACCGG
GTGGCGCACG CCACCGGAAT CCGGCTGGAG GTGATCGACC GCGAGACCGA GGCCCGGCTG
GCGGTGATCG GCTGTTCGCC GCTGCTCGAT CCGCTGGGCC GCGGCGCCAT TCTGTTCGAT
ATCGGCGGCG GTTCCTCCGA ACTGGTCTGG ATCGAGCGCG ACCCGGCGCG CCCGGAGCTG
GCGCCGCGGA TCAAGGCCTG GATGTCGATT CCGCTCGGCG TGGTGACGCT GGCGGAGCGG
TTCGGCGGCA AGGTGGTGAG CGAGCAGTCT TACGCGGCTA TGGTGCAGGC GGTGGCCATC
CATGTCGCGC CGTTCGCCGC AGGGCTCGGC GGCGACCTGT CCGCGATGCA CCTGCTCGGC
ACCTCGGGGA CGGTGACGAC GCTGGCCGGC ATCCACCTCG ATCTGGCGCG TTACGACCGC
AGACGGGTCG ACGGGGTCTG GCTCAGCGAC GCGGAACTGA CCGAAACCAT CGCCAAGCTG
CACGGCATGA GCTATCACGA CCGCGCCGGC AACAGCTGCA TCGGGGTCGA GCGGGCCGAC
CTGGTGCTGG CCGGCTGCGC CATTCTCGAC GCCATTCGCG ACGCTTTTCC GCTGCCGCGG
CTGCGGGTCG CCGATCGCGG GTTGCGCGAG GGCATGCTGG TGGAAATGAT GCGGCAGGAC
GGCGCGATCG GGCCCGCTTG A
 
Protein sequence
MMDDTRLRDG LEPREEPQAA NAVERVGVAV DPADGSRVAD GSHTHDGVYA AIDLGTNNCR 
LLIARPTGDG FRVIDSFSRI IRLGEGMAAS GRISEAAIGR AVSALTVCSD KIHARKATRR
RLIATEACRA AANADEFLDR VAHATGIRLE VIDRETEARL AVIGCSPLLD PLGRGAILFD
IGGGSSELVW IERDPARPEL APRIKAWMSI PLGVVTLAER FGGKVVSEQS YAAMVQAVAI
HVAPFAAGLG GDLSAMHLLG TSGTVTTLAG IHLDLARYDR RRVDGVWLSD AELTETIAKL
HGMSYHDRAG NSCIGVERAD LVLAGCAILD AIRDAFPLPR LRVADRGLRE GMLVEMMRQD
GAIGPA