Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_3049 |
Symbol | |
ID | 3973367 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | + |
Start bp | 3378992 |
End bp | 3379621 |
Gene Length | 630 bp |
Protein Length | 209 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637926159 |
Product | hypothetical protein |
Protein accession | YP_532912 |
Protein GI | 90424542 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.768597 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAAACAG CAGTTGCATC AGTTCCTGAT CAGATCATGA AGCGCGCCCG TGCAGCTGGG CGCGGCGGCG TTTACACGCC CAGTGACTTC CTCAACGTGG CGGCGCGAGC CGCGGTCGAT CAGGCGCTTT CGAGGTTGGT CAAGGCCGGG AAGCTGCGCC GGCTAGCTCG GGGCCTGTAC GACTTTCCCA AGGTCCATCC GAAACTCGGC CAGCTTTCCC CAGCACCCGA TGATGTCGCG CATGCCTTGG CGCGCGAGAC TGGATCGCAG GTTCAGATCG CAGGTGCGCG CGCTGCAAAC GCTCTCGGCC TTACGACGCA GGTGCCTGCG AAGAACACTT ACTTGACCGA TGGCCCTTCT CGCCGCGTCG TGCTCGGCAA GCGCGTGGTC GACCTTCGGC ATGCATCGCC GAAGCATTTG ATCGCCCCAG GCAGCCCGGC GGGCACCGTC GTTCAGGCCC TTCGCCATGT CGGGGCCGTG CGTGCGGCTG ATGTCGCGCA AGTCGCTTCG CGCCAACTCA CGGTGAGTGA CAAGAAAACG CTCGCGTTCT CCGCGGTGCA GGCGCCAGCG TGGATGCGGC CGACGCTGGT ATCGATCGCT AACGCGGTGG CGGCCGGCAT CGATGGATAA
|
Protein sequence | MKTAVASVPD QIMKRARAAG RGGVYTPSDF LNVAARAAVD QALSRLVKAG KLRRLARGLY DFPKVHPKLG QLSPAPDDVA HALARETGSQ VQIAGARAAN ALGLTTQVPA KNTYLTDGPS RRVVLGKRVV DLRHASPKHL IAPGSPAGTV VQALRHVGAV RAADVAQVAS RQLTVSDKKT LAFSAVQAPA WMRPTLVSIA NAVAAGIDG
|
| |