Gene RPC_2713 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_2713 
Symbol 
ID3970305 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp2943616 
End bp2944293 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content62% 
IMG OID637925824 
Producthypothetical protein 
Protein accessionYP_532581 
Protein GI90424211 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0684] Demethylmenaquinone methyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGCAG GGTTCAGGAT ACTGAAACGA CAACGCAAGG TCGATGCCGA CGTTGTCGCG 
CGCTTTGCGC GTCTGCCGGT CGCAAATGTG AGCGACAGCA TGTCCCGTCT GACGGCGGCC
GGCGCCCGAC TTCGTCCGAT GCATCAGGGC GGTGGACTTG CGGGCCCGGC GCTGACGGTG
AAGGCACCTC CCGGCGACAA TCTGATGGTG CACAAGGCGA TCGCGTTTGC TGAGCCCGGC
GATATCATTG TGGTGGACGT TGGCGGCGAC CTGACCAACG CCATCATCGG CGAAATGATG
CTCATGCAGA TGGTCAAGCG AGGGGTCGCC GGCGTGGTCA TCAATGGCGC GATCCGCGAC
GCCGGTCATA TTCGCGGCCA GAAGATTCCG GTTTTCGCGG CAGGCGTCAC GCACCGCGGC
CCTTACAAGA ACGGGCCCGG AGAGATCAAT GTTCCGATCG CCATCGACGG AATGGTGATC
GAGTCCGGCG ACCTCATCAT CGGCGATGAT GACGGCCTGC TCTGCGTGCC GTTCGATCAG
ACCGACGCGG TATTTGCGGC GGCCACCGCA AAGTTCGAAG CAGAGCAAAA GCAGATCGCC
AACATCGAAG CCGGCACCCA TGATGCCTCG TGGGTGGACA AGCAGTTGCG CGCGATGAAG
TGCGAAGGCA TCGACTGA
 
Protein sequence
MAAGFRILKR QRKVDADVVA RFARLPVANV SDSMSRLTAA GARLRPMHQG GGLAGPALTV 
KAPPGDNLMV HKAIAFAEPG DIIVVDVGGD LTNAIIGEMM LMQMVKRGVA GVVINGAIRD
AGHIRGQKIP VFAAGVTHRG PYKNGPGEIN VPIAIDGMVI ESGDLIIGDD DGLLCVPFDQ
TDAVFAAATA KFEAEQKQIA NIEAGTHDAS WVDKQLRAMK CEGID