Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_2640 |
Symbol | |
ID | 3973049 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | + |
Start bp | 2871086 |
End bp | 2871904 |
Gene Length | 819 bp |
Protein Length | 272 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 637925751 |
Product | ribonuclease III |
Protein accession | YP_532509 |
Protein GI | 90424139 |
COG category | [K] Transcription |
COG ID | [COG0571] dsRNA-specific ribonuclease |
TIGRFAM ID | [TIGR02191] ribonuclease III, bacterial |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.943861 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGCAGG ACACCACCAG CATCGAGGTT TCGCCGACAC CGGACGCCGC GGCCGCTGCG CCCGACCCCG GTCGCGAAAC CGCGGCCGCG CGCAAGCGGC GCAGCAAGGC CGACGCCAAG GCCGCCGCCG CCGCGATCGA AGCGCGGATC GGGCACGCCT TCGCCGATCC GGCGCTGCTG GCTACCGCCT TCACCCACGT CTCGGCGCTG AAATCGGCGC GCAACCGCGC CGACAGCTAT CAGCGGCTGG AGTTTCTCGG CGATCACGTG CTGGGCCTCG TGGTCTCCGA CATGCTGTAT CGGGCGTTTC CCAATGCCGA CGAGGGCGAA CTGTCGAAGC GGCTGGCCGA TCTGGTGCGC AAGGAAGCCT GCGCGGACGT GGCGCGCAGC CTCGACCTGT TGGACGGCAT CAAGCTCGGC ACGGTCGGCG CCGGCGCCGG CGCCAGGTTG CGCAAATCCG TGCTCGGCGA CATCTGCGAA GCGGTGATCG GCGCGATCTT CCTCGACGGC GGCTATCCGG CGGCCGAGAG TTTCGTGCAA CGCAACTGGC TGGAGCGGAT GCGCAAGCCG GTGCGGCCGT TGCGCGACGC CAAGACGATT CTGCAGGAAT GGGCGCAGGG CAAGGGTCTG CCGACCCCGG TCTATCGCGA AGTCGAACGC ACCGGGCCGC ATCACGATCC GCAATTCCGC GTCGCGGTGG ACCTGCCGGG CCTGGCGCCC GCGGAAGGCA TTGGCGGCAG CAAGCGCGCC GCAGAAAAAG TCGCAGCCTC GGTGATGCTG GCCCGCGAGG GCGTCAGCTC CGGCGGCAAT GAAGGATGA
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Protein sequence | MKQDTTSIEV SPTPDAAAAA PDPGRETAAA RKRRSKADAK AAAAAIEARI GHAFADPALL ATAFTHVSAL KSARNRADSY QRLEFLGDHV LGLVVSDMLY RAFPNADEGE LSKRLADLVR KEACADVARS LDLLDGIKLG TVGAGAGARL RKSVLGDICE AVIGAIFLDG GYPAAESFVQ RNWLERMRKP VRPLRDAKTI LQEWAQGKGL PTPVYREVER TGPHHDPQFR VAVDLPGLAP AEGIGGSKRA AEKVAASVML AREGVSSGGN EG
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