| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_2460 |
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| Symbol | |
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| ID | 3971351 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 2666258 |
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| End bp | 2667481 |
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| Gene Length | 1224 bp |
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| Protein Length | 407 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637925568 |
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| Product | putative urea/short-chain binding protein of ABC transporter |
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| Protein accession | YP_532330 |
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| Protein GI | 90423960 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.04538 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.187515 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCGAG TGCGAGTGGC GCTGATGGCG GCGGGACTGG TGGCCAGCGC ATCCTGCGGC
GCGGCCAAGG CCGAGATTTC CGATGACGTG GTGCGGATCG GCGTGCTCAA CGACATTTCC
GGCGTGTTCC AGGACACCAA CGGCATGGGC TCGGTGGAGG CCGCGCGGAT GGCGGCGGAA
GATTTTGTCG CCGCCGGCGG CAAGGCCACC AAGGTCGAGA TCGTCTACGC CGATCACCAG
AACAAGCCCG ATGTCGGCGC CGCGATCGCT CGCCGCTGGC TGGATATCGA GAAAGTCGAC
GCCATCGTCG ACGTGCCGAA TTCCTCGGTC GGCCTCGCGC TCAACGCGCT ATTGCGCGGC
AGCCGGATGA CGTTTCTCGC CTCGACCACC GGGACCTCGG AACTGACCGG CAAAGAATGT
TCGCCCAACA CCATCCAATG GACCAACGAT ACCTGGGCCA GCGGCCACGC CACCGCGGCG
GCGGCCATGG TCCGCGGCGG CCGCGACTGG TACTTCATCA CGGTGAACTA CGCGCTGGGG
CAGGGTATCG AGGCCGAAGC CAGCCGTTAC ATCGAAGGCC ATGGCGGCCG GGTGCTGGGC
TCCGCCAGGC ATCCGCTCGG TACCTCGGAC TACGCCTCGC TGCTGTTGCA GGCGCAGGGC
TCCGGGGCAA AGGTGATCGG TCTCGCCAAT GCCGGCCCCG ACACCATCAA TGCGGTGAAG
CAGGCCGGCG AATTCGGCCT GCGGCAACAC GGCCAGACGC TGGTGGCGTT CATGATGGCG
ATCAACGACG TCCATGCCAT GGGCTTGCCG GTGGCGCAGG GGCTGTTGCT GACCGAGAGC
TTTTACTGGG ATCTGAGCGA CGACACCCGT GCCTTCGCCA GGCGCTTTGC GCAGCGGCCC
GGGATCGGCG GCAAGATGCC GAGCGGCAAT CAGGCGGGGG TCTATGCCGC GACCTTGGCC
TATCTCAACG CGGTGGCGGC GACCGGCAGC GACAATGCAC AGGACGTGGT GCCGCAGCTG
AAGACGCTGA AGGGGCACGA CAAGTTATTC GGCGAGATCG CGATCCGCCC GGACGGCCGG
GTGATCCATC CGATCTATCT GTTCGAGATC AAGACGCCGT CGGAATCGAA ATATCCTTAC
GACTACTACA AGCTGGTTTC GACGATTGCG CCCGCGCAGG CCTATCGGCC GCTGGCCGAG
GGCGGCTGCC CGCTGGTGAA GTAG
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| Protein sequence | MTRVRVALMA AGLVASASCG AAKAEISDDV VRIGVLNDIS GVFQDTNGMG SVEAARMAAE
DFVAAGGKAT KVEIVYADHQ NKPDVGAAIA RRWLDIEKVD AIVDVPNSSV GLALNALLRG
SRMTFLASTT GTSELTGKEC SPNTIQWTND TWASGHATAA AAMVRGGRDW YFITVNYALG
QGIEAEASRY IEGHGGRVLG SARHPLGTSD YASLLLQAQG SGAKVIGLAN AGPDTINAVK
QAGEFGLRQH GQTLVAFMMA INDVHAMGLP VAQGLLLTES FYWDLSDDTR AFARRFAQRP
GIGGKMPSGN QAGVYAATLA YLNAVAATGS DNAQDVVPQL KTLKGHDKLF GEIAIRPDGR
VIHPIYLFEI KTPSESKYPY DYYKLVSTIA PAQAYRPLAE GGCPLVK
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