| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_2178 |
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| Symbol | |
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| ID | 3969160 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 2371397 |
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| End bp | 2372578 |
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| Gene Length | 1182 bp |
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| Protein Length | 393 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637925286 |
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| Product | extensin-like |
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| Protein accession | YP_532051 |
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| Protein GI | 90423681 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3921] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.689596 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCGCG GAGTTCGTTT GTATCTCGTC GGCTCCTTCG TCCTCGTCGC GATGGCTGGT
TGCGGTCGGT ATCAAGCCGA ACGAGAACCC TGGCGCGCCG AGGCCGAGAT CGCTTGCCTG
AAATCCGGCG CGGTGAAAGA GACCCAAGAC CTGGTGCGGA TCGATCCGAT CTCCGGCCCC
GGGGTCTGCG GTGCCGAGTT TCCGTTGAAG GTCACGGCCT TGGGCGAAAG CGCCGGCCTC
GGCTTTGCCG ACGATCTGCG ACCGCCGGGC TCGATCGGTG GCGACCAGCC GCGCTGGCCG
GTCAATCAGG CACGGTCAGC GCCCAGCTCC TATCCGGTGA CCAGCGCGCC GCAGTCGCAA
TACCCGTCCT CGGCCGGACC GATGACGCTG AACCCGCCGG GCTTAGCGCA GCCCGCCGAA
GACATCGATC TACCCCCGGA TGGCGCGCCG CAGGGGGCCT ACCAGGCCAC GGAACCGCCG
CGTTATCGCC CGGTGGGCGC CGCAAGCTCC GGCTATTCGG CCGATCGCAA CGCTGCCCCA
GCTTTGCCGC AGGATTATTC GCAGCCGCGG CTCGGCCCCG GGCCGGGCGA TCTCACCGGC
GCGGTCGGCC CGGTGGCGCT GAAGCCGGTC GCCACCTTGG CCTGTCCGAT CGTCTCGGCG
CTCGACAAAT GGCTGGCGGA GGCGGTGCAG CCGGCGGCGC AGCGCTGGTT CGGCGTCCGC
GTCGTCGAGA TCAAGCAGAT CTCGGCATAT TCCTGCCGCG GCATGAACGG CAATTCGCGC
GCGCATATTT CCGAACACGC CTTCGGCAAC GCGCTCGACA TCGCCGCCTT CACGCTGGCC
GACGGCCGGC GCATCTCGGT CAAGGACGGC TGGAAGGGCT TGCCGGAAGA ACAGGGCTTC
TTGCGCGACG TCCATGCCTC GGCCTGCCAG GTGTTCAACA CCGTGCTGTC GCCGGGCTCC
AACGTCTTCC ACTACGATCA CATCCACGTC GATCTGATGC GCCGCTCGAG CCGCCGCATC
ATCTGCCAGC CGGCCGCGGT GTCCGGCGAA GAGGTCGCCG CGCGGGTCCA GCAGCGCAAC
CCCTATGCGA CGAATTCGCC GGCCATCACC GGCTCTTTGG GCGCGCACAA GGTGCCGCCG
CGGCACAAGC CCGCCGGCGA CGACGATTAC GAAGACGAGT AG
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| Protein sequence | MTRGVRLYLV GSFVLVAMAG CGRYQAEREP WRAEAEIACL KSGAVKETQD LVRIDPISGP
GVCGAEFPLK VTALGESAGL GFADDLRPPG SIGGDQPRWP VNQARSAPSS YPVTSAPQSQ
YPSSAGPMTL NPPGLAQPAE DIDLPPDGAP QGAYQATEPP RYRPVGAASS GYSADRNAAP
ALPQDYSQPR LGPGPGDLTG AVGPVALKPV ATLACPIVSA LDKWLAEAVQ PAAQRWFGVR
VVEIKQISAY SCRGMNGNSR AHISEHAFGN ALDIAAFTLA DGRRISVKDG WKGLPEEQGF
LRDVHASACQ VFNTVLSPGS NVFHYDHIHV DLMRRSSRRI ICQPAAVSGE EVAARVQQRN
PYATNSPAIT GSLGAHKVPP RHKPAGDDDY EDE
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