| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_2147 |
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| Symbol | |
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| ID | 3972434 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 2341081 |
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| End bp | 2341965 |
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| Gene Length | 885 bp |
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| Protein Length | 294 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 637925255 |
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| Product | dihydrodipicolinate synthase |
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| Protein accession | YP_532020 |
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| Protein GI | 90423650 |
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| COG category | [E] Amino acid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase |
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| TIGRFAM ID | [TIGR00674] dihydrodipicolinate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0181413 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACGCTT ACGCGCCGAC ACCTGACCTC AGCCGCCTCT CTTCGATGGC GTGGCTCGAC
GGCTGCATCG CCGATCTGCC GACCCCGTTC GACGCCCACG ACGGCCTCGA TTTCGCAGGC
GTAGCCCGGT TGTGCGAGCG GCAGATTGCG GCCGGCTGTC CGGCGATCCT GATCGGCGAC
AATGCCGGGG AGGCGGCGAC GCTGTGCCAC GCCGAACACG CCGCGCTGAT CCGCACCGCG
GTGGCGATCG CGCGCGGCCG CGTACGGGTG ATTGCGGGGG CCGGCAGCAA TGCCACCGCG
CAGGCGATCG CGCTGACCCG CCAAGCCGAG GCGGCGGGGG CGGCCGCCGT GCTGTCGGTG
GTGCCTTACT ACAACAGGCC GATGCAACAG GGCATCGTTG CGCATTTCGA GGCGATCGCC
GGCGCCACCG CGCTGCCGGT GATCCTGTAT GACAATCCGT CGCGTTGCGC CCGCGGCCTG
ACCGACGACA CCGTGGCGCG GCTGGCGCGG CTGCCGAATG TCGTCGGGCT GGTCGACGCC
GGCGGCGATC TCGGACGTCC GCAGCGGCTG CGCGCACGCT TGCCGGCGGG CTTTCGGCTG
CTGTCGGGCG ATGACGCCAG CGCGCCGGCC TTCTTGGCGT TGGGGGGCGA CGGCGCCATC
TCGGCGACCG CGAATCTGTG CTCTGCGCAC CCGGCTATGC GCGATCATTG GATGCGATTG
ACCGCGGCTC TCGCCGAGGA CGGCACCGCG GCCGGGTTGA AATACGCGCT GAGCCTGCTC
GGGGCGATCG CGCCGCATGT GCGGCCGCCG ATGGTCGAGC CCGGCGAGGC CGCCAAGGCC
GCCATCGCAC GAGCGCTGAT GGCGGGGGTG GACGACGCCC GCTAG
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| Protein sequence | MDAYAPTPDL SRLSSMAWLD GCIADLPTPF DAHDGLDFAG VARLCERQIA AGCPAILIGD
NAGEAATLCH AEHAALIRTA VAIARGRVRV IAGAGSNATA QAIALTRQAE AAGAAAVLSV
VPYYNRPMQQ GIVAHFEAIA GATALPVILY DNPSRCARGL TDDTVARLAR LPNVVGLVDA
GGDLGRPQRL RARLPAGFRL LSGDDASAPA FLALGGDGAI SATANLCSAH PAMRDHWMRL
TAALAEDGTA AGLKYALSLL GAIAPHVRPP MVEPGEAAKA AIARALMAGV DDAR
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