Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_2114 |
Symbol | |
ID | 3973670 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | - |
Start bp | 2314574 |
End bp | 2315110 |
Gene Length | 537 bp |
Protein Length | 178 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 637925222 |
Product | MgtC/SapB transporter |
Protein accession | YP_531987 |
Protein GI | 90423617 |
COG category | [S] Function unknown |
COG ID | [COG1285] Uncharacterized membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.170064 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGATCGAGT GGTCGGAGAT CGTCCTGCGC CTTGGCGTCG CTACCCTGGC CGGTGGCGCG ATCGGACTCA ATCGCGACCT GCACGGCAAG CCGATCGGCG TCCGCACGCT GGGGCTCGTC AGCCTCGCCT CCGCGGTGGT GGTGATGTTG GCCGATCCCG GCGACAGCGT CGGCCGCATC ACCGACGCCA CCAGCCGGGT AATTCAGGGC ATCCTGACCG GCATCGGGTT TCTCGGCGCC GGCGTGATCA TGCGCTCGCC GCACCGCGCC AGGGTCCGCG GCCTGACCAG TGCCGCCTGC ACCTGGCTCA CCGCCTGCGT CGGCATCGTT TGCGGCGCCG GGCAATGGCG CATCGTCGGC GTGGCGCTGG CGATCGCCTT CGTCATCCTG CTGATCGGCG GCCCGTTGGA GCGCACGCTG CATCGGCTGC TCGGCGGCAA GGACGAGCAA GCGGAAAAGC CGCCCGCCGG GACAGCGCCG GGCGATGCAG GCGCCGTCGA CGCCGCCGGA CCTGATCGAA CAACCAAGCC AGAGTGA
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Protein sequence | MIEWSEIVLR LGVATLAGGA IGLNRDLHGK PIGVRTLGLV SLASAVVVML ADPGDSVGRI TDATSRVIQG ILTGIGFLGA GVIMRSPHRA RVRGLTSAAC TWLTACVGIV CGAGQWRIVG VALAIAFVIL LIGGPLERTL HRLLGGKDEQ AEKPPAGTAP GDAGAVDAAG PDRTTKPE
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