5 homologs were found in PanDaTox collection
for query gene RPC_1788 on replicon NC_007925
Organism: Rhodopseudomonas palustris BisB18



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007925  RPC_1788  hypothetical protein  100 
 
 
132 aa  271  2.0000000000000002e-72  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.0169511 
 
 
-
 
NC_009051  Memar_1119  ATPase  36.11 
 
 
395 aa  48.5  0.00003  Methanoculleus marisnigri JR1  Archaea  normal  0.907161  n/a   
 
 
-
 
NC_002950  PG2078  hypothetical protein  29.63 
 
 
390 aa  48.1  0.00004  Porphyromonas gingivalis W83  Bacteria  n/a    normal 
 
 
-
 
NC_008639  Cpha266_0840  ribosome assembly protein 4 (RSA4)  38.98 
 
 
1868 aa  42.7  0.002  Chlorobium phaeobacteroides DSM 266  Bacteria  normal  n/a   
 
 
-
 
NC_007644  Moth_1746  hypothetical protein  34.33 
 
 
373 aa  40.8  0.006  Moorella thermoacetica ATCC 39073  Bacteria  hitchhiker  0.00000207576  normal  0.634791 
 
 
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