Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_1780 |
Symbol | |
ID | 3972219 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | + |
Start bp | 1934085 |
End bp | 1934798 |
Gene Length | 714 bp |
Protein Length | 237 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 637924893 |
Product | peptidoglycan binding domain-containing protein |
Protein accession | YP_531658 |
Protein GI | 90423288 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.0189708 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCCTAGGA AAGCCGACAG AAACGACAAT CAAATTCCTC GTCGCGGCCG CGCGGTCGCA ATCGACGCCG AACAGGAACG CGGCTTGACG ATGCGGCTGT TGCTGCACAG CCCGAAGGAT TTGGTCGCGG CGATGTTCGC GTCGGCGGCG GTGATCGCCA TCATCACCAA CGCGCTGTTC ATGCAGGCAG GCCGGCATCC GTCGCCGATG TTCGGCAGCA GCATGACGGC GCCGAGCCTG CCGCCCTCGG TCGCAAATCT GCTGCCGCGT CCGCGCCCGG CTGACGCCGC CGGCCGCTTG GCTGAACCGC GCCCCAACGA GTTGAAGGCC GCCGAACGAG CGGAGGCGAA ATCCGCCGAC GGCCGTGCGG TGGATCTGTT CGCCAGCCCG ACCAAGACCA CAGCGCCGGT ATCGACCGCG ACGCCCGCCG CGGCCGCCGC TTCGGCGGTG CCGCGCCCCC CGGCGCCGGT GCCGGCAGCA ACCCGTAGCG ATCCGCTCGG CGATCTGATC ACCTCGTCGC GCCGCATCGC GCAGGTGCAG CGCGCGCTGA CCGAATATGG CTACGGCCAA TTGAAGCCGA CCGGCACCGT CGGCTCCGAC ACCCAGGCGG CGATCCAGAA ATTCGAGCGC GACCGCAAGA TCCCGGTCAC CGGGCAGATC TCGGATCGTC TGGTGCGCGA ATTGTCGGCG ATGACCGGCC GGCCGATCGA GTAG
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Protein sequence | MPRKADRNDN QIPRRGRAVA IDAEQERGLT MRLLLHSPKD LVAAMFASAA VIAIITNALF MQAGRHPSPM FGSSMTAPSL PPSVANLLPR PRPADAAGRL AEPRPNELKA AERAEAKSAD GRAVDLFASP TKTTAPVSTA TPAAAAASAV PRPPAPVPAA TRSDPLGDLI TSSRRIAQVQ RALTEYGYGQ LKPTGTVGSD TQAAIQKFER DRKIPVTGQI SDRLVRELSA MTGRPIE
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