| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_1719 |
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| Symbol | |
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| ID | 3972372 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 1865265 |
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| End bp | 1866521 |
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| Gene Length | 1257 bp |
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| Protein Length | 418 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637924832 |
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| Product | amine oxidase |
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| Protein accession | YP_531597 |
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| Protein GI | 90423227 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1232] Protoporphyrinogen oxidase |
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| TIGRFAM ID | [TIGR03467] squalene-associated FAD-dependent desaturase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.188576 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.0628779 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCAACA CCGTGCATAT CATCGGCGCC GGAATTTCGG GGCTGTCCGC CGCGATCCGT
CTTGCCAAGG CCGGCTACCA GGTTCACGTC CACGAGGCGA TGCAGCAGGC CGGCGGCCGC
TGCCGCTCCT ATTTCGACGC AGCGACCGGG CTGACCATCG ACAACGGCAA TCATCTGCTG
CTGTCCGGCA ACAGCGCCGC GGTCGGCTAT GCGCGATCGA TCGGCACCGA GGCCGGCCTG
GTCGGGCCCG CGACCGCGCA GTTCCCGTTC GTCGATTTGG CCAACGATCA GCGCTGGACG
TTACAGCTCG GCGACGGCCG GCTGCCGCTG TGGGTGCTCG ACGACGCGCG CCGGGTGCCC
GGCACCACGC TGCGCGACTA TCTGGCTTTG ATGCCGCTGA TCTGGGCGCC GACCAGCCGG
CTGGTCGGCG ACGCGATCCG CTGCGAGGGC ACGCTGTATC GCAACCTGGT GCAGCCGCTG
TTGCTCGCCG CCCTCAACGT CGATCCGCCG GAAGGCTCCG CAGGGCTGGC CGGCGCGGTG
GTCCGCGAGA CGTTGCTGGC GGGTGGCAAG GCCTGCCGGC CGCTGATCGC GCGCGACGGC
CTGAGCGCGG TGCTGGTGGA GCCCGCGGTG GAGCTGTTGC GCAGCTCCGG CGCCAGCGTG
CAGTTCGGCC ATGAACTGCG CAAACTCACC ATGGCCGACA ACAAGATCAG CGCATTGGAT
TTCGGCGACG ACAGCGTCGC GCTTGGCCCC GACGACGCCG TGGTGCTGGC GGTGCCGCCA
CGGCCGGCGG CGTCGCTGCT GCCAGGCCTG AAGACGCCGG GCAAATATCG CGCGATCGTC
AACGCGCATT TCAACTATGC GCCGCCGCAC GGCCAGCCGC CGCTGGTCGG CGTAGTCGGC
GGGCTGGTGG AGTGGCTGTT CGCGTTTCCG AACCGGCTTT CGGTCACCAT CAGCAACGGC
GACCGCCTGG TGGAATTGCC GCGCGAGCAA TTGGCGCAGC AGATCTGGCA GGAGATTTGT
ACGCTGACCG GGATCGTGGC CGACCTGCCG CCGTGGCAGA TCGTGCGCGA GCGCCGCGCC
ACTTTCGAGG CGACGCCGGA GCAGAACGCG CTGCGCCCGG GAGCGATCAC GGCTTGGAAC
AACCTGGTGC TGGCGGGCGA CTGGACTGAT ACCGGGCTGC CGGCGACGAT CGAAGGATCG
GTGCGGTCCG GAAACCGCGC CGCCGAGCTG GTGCAGGCGA TCGGCCGGAG CCGATGA
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| Protein sequence | MPNTVHIIGA GISGLSAAIR LAKAGYQVHV HEAMQQAGGR CRSYFDAATG LTIDNGNHLL
LSGNSAAVGY ARSIGTEAGL VGPATAQFPF VDLANDQRWT LQLGDGRLPL WVLDDARRVP
GTTLRDYLAL MPLIWAPTSR LVGDAIRCEG TLYRNLVQPL LLAALNVDPP EGSAGLAGAV
VRETLLAGGK ACRPLIARDG LSAVLVEPAV ELLRSSGASV QFGHELRKLT MADNKISALD
FGDDSVALGP DDAVVLAVPP RPAASLLPGL KTPGKYRAIV NAHFNYAPPH GQPPLVGVVG
GLVEWLFAFP NRLSVTISNG DRLVELPREQ LAQQIWQEIC TLTGIVADLP PWQIVRERRA
TFEATPEQNA LRPGAITAWN NLVLAGDWTD TGLPATIEGS VRSGNRAAEL VQAIGRSR
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