| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_1688 |
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| Symbol | |
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| ID | 3972748 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 1827640 |
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| End bp | 1828989 |
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| Gene Length | 1350 bp |
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| Protein Length | 449 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637924801 |
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| Product | amidase |
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| Protein accession | YP_531566 |
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| Protein GI | 90423196 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.481461 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCACGC TTCCGACCCT TGCCGCGCTC GCGGCTGACC TCGACGCCGG CCGCACCAGC
GCCCGCAAGC TGGTCGACCA ATGCCTCGCG GCGATTCAAG ATCCGAACGG CGAGGGCGCG
CGGGCGTTCG TACGCGTCGA TGCCGCGGCG GCGATCGCGG CAGCCGAGGC GATGGACGCG
TTGCGCAAAG CCAACGCCGC GCCATCGGCC TTCGCGGGCA TTCCGGTCTC GATCAAGGAT
CTGTTCGACA TCAAGGGCCA GGTGACCCGC GCCGGTTCCC GCGCGCTCGA CGACAACCCG
CCCGCGGAGG CCGACGCGGC CGCGGTGGCG CGGCTGCGCC GCGCCGGCTT CGTGGTGATC
GGCCGCACCA ACATGACCGA ATTTGCCTAT TCGGGGATCG GCATCAACCC GCATTACGGC
ACACCGAAGA GCACCTGGCA GCGCGACGTC GGCCATGTGC CCGGCGGCTC CTCCGCCGGT
GCGGCGGTTT CGGTCGCCGA CGGCATGGCG CACGGCGCGC TCGGCACCGA CACCGGCGGT
TCCTGCCGGA TTCCGGCGGC GTTCAATGGC GTGGTCGGCT TCAAGCCGAC GCAAGCCCGG
GTGCCGCTCG ACGGCGCGGT GCCGCTGTCG CCGACGCTCG ACAGTATCGG GCCGTTGGCG
CGTAGCGTGC AATGCTGCGC CACGCTCGAC GCGGTGCTGG CGGATCAGCC GCTGACCACG
CTGCAGTCGC GGCCGGTGCG CGGTATGCGT CTCGCGGTGC CGACCACGGT GGCGCTCGAC
GACCTCGACG ACGCGGTGGC GCAGGCGTTC GAACGCGCGC TCGAAACACT GTCGCGGGCC
GGGGCCTGGA TCGAGCGGAT CGCGGTGCCG GAATTTCTCG ACGTCGCGCC GATGAGTGCC
AAGGGCGGGT TCACCGCCGC CGAAAGTTTT GCCTGGCATC GCTATCTGAT CGTCGCCAAT
GGCGACGTCT ACGATCCGCG GGTGCGCGAC CGCATCATCC GCGGCGAGAC GCAGAGCGCC
GCCGATTACA TCGACCTGAT CAACGCGCGC AAATCGCTGG TGGCGCGCGC GACGCAGCGG
CTGTCGCCGT ATGATGCGAT CGTGCTGCCG ACCACCGCGA ACACGCCGCC GAAGATCGCC
GACCTCGCCG ACGACAAAGC GTTCACCAAG GCCAATTTGC TGGCATTGCG CAATTGCACA
CTGATCAACA TGATCGACGG CTGCGCGATC TCGCTGCCGT GTCACCGCGA CGGCGAGGTG
CCGGTCGGGT TGATGCTGGC GGGCAGTGCC GGCACCGATC AGCGGATTTT TGAACTCGCA
GCAGGTATGG AAAGTCTTAT TCGTGGTTGA
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| Protein sequence | MPTLPTLAAL AADLDAGRTS ARKLVDQCLA AIQDPNGEGA RAFVRVDAAA AIAAAEAMDA
LRKANAAPSA FAGIPVSIKD LFDIKGQVTR AGSRALDDNP PAEADAAAVA RLRRAGFVVI
GRTNMTEFAY SGIGINPHYG TPKSTWQRDV GHVPGGSSAG AAVSVADGMA HGALGTDTGG
SCRIPAAFNG VVGFKPTQAR VPLDGAVPLS PTLDSIGPLA RSVQCCATLD AVLADQPLTT
LQSRPVRGMR LAVPTTVALD DLDDAVAQAF ERALETLSRA GAWIERIAVP EFLDVAPMSA
KGGFTAAESF AWHRYLIVAN GDVYDPRVRD RIIRGETQSA ADYIDLINAR KSLVARATQR
LSPYDAIVLP TTANTPPKIA DLADDKAFTK ANLLALRNCT LINMIDGCAI SLPCHRDGEV
PVGLMLAGSA GTDQRIFELA AGMESLIRG
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