| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_1671 |
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| Symbol | |
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| ID | 3972731 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 1803509 |
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| End bp | 1804957 |
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| Gene Length | 1449 bp |
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| Protein Length | 482 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637924785 |
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| Product | amidase |
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| Protein accession | YP_531550 |
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| Protein GI | 90423180 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.677063 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACATCTG ACGAACTGAT CCGGGCGACG GCGTGCGACG TCGTCGACAA GCTCAACGCT
GGCGAAGTCA CGCCGCTGCA ACTGCTCGAT GCGTTGGAGG CGCGGATCGC GGCCGTCGAC
GGCGCGGTCA ACGCGTTGCC GACGCGCTGC TTCGAGCGCG CCCGCCGCCA CGCCGACGCA
TTGATGCAGC GGCCGCGCGG CGAGCGCGGA TTGCTCGCCG GCCTGCCGCT GCCGATCAAG
GATCTCAGCG ACGTCGAGGG TGTGCTGTCG ACGCAGGGCT CCAAGATCTT CAAGGATCAC
ATCCCGGCGC GCTCCGACCT GATGGTCGAG CATCTCGAAG CCAACGGCGC GGTGATCTAC
GCCAAGTCCA ACACCCCGGA ATTCGGCGCC GGCGCTAACA CCTTCAACGA ACTGTTCGGC
GCCACCCGCA ATCCCTGGGA TCTGTCGCGC TCCGCCGCGG GCTCCTCCGG CGGCGCCGCG
GTGGCGCTCG CCACCGGCAC GGCCTGGCTG GCGCAGGGCA CCGACATGGG CGGCTCGCTA
CGCAACCCGG CGAGCTTCTG CGGCGTCGTC GGGATGCGGC CGAGCATCGG CCGCGTCGCC
CACACCCCGG CCGCCAAGAT CGATCGCACG CTCGGCGTGG CCGGTCCGAT GGCGCGCAAT
GTCGAGGACC TCGCGCTGTT GCTCGACGCG ATGAGCGGCG AACAGCAAGC CGACCCGTTG
TCGCTGCCGT CGCCGCGCGA CTCGTTCCGC CGCGCCGCGC GTTACGGCGC GCCGCCGAAG
CGCGTCGCTT ATTCGCCCGA CCTCGGCATC ACCCCGGTCG ATCCGGAGGT CGCCGCGATC
ACCCGCAAGG CGGCGTTGCG TTTTGCCGAT GCCGGCGTTG CGGTGGAATT GGCGCATCCG
GATCTGCGCG AAGCGCACGA GTGTTTTCAA GTGCTGCGCG CGTTCGATTT CGCGATCAGC
AAGGCGACAT TGCTGCGCGA GTGCCGCGAC CAGCTGAAGC CGGAAGTGGT GTGGAATATC
GAGCAGGGGC TCAAGCTCAC GGTCGACGAT CTGGCGCGCG CCGAAGCGCA GCGCGTGGCG
ATGACCGCGC GCACGCTGGA ATTTTTCCAG ACCTACGATC TGCTGCTGAC GCCGGCCACC
ATCGTGGCGC CGTACCCGAT CGAGAACCGC TACGTCGCCG AATGCGACGG CCACAGCTTC
GACAACTACG TCGAGTGGCT GGCGATCGTC TATGCGATCA CCCTGGTCTG TTGTCCGGCG
CTGTCGCTGC CGTGCGGCTT CACCGCCACC GGCTTGCCGG TGGGCTTGCA GATCGTGGCG
CCGCCGCGCG GCGAGGCGCG GCTACTGGCC GGCGCCCGCG TCCTGGAGGA TATTCTGGGG
CTGCGTGGCT CCACCCCGAT CGATCCGCGC CCGGCGCCGT CAGCCGGCGC GCACCCCGCG
CAAATGTGA
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| Protein sequence | MTSDELIRAT ACDVVDKLNA GEVTPLQLLD ALEARIAAVD GAVNALPTRC FERARRHADA
LMQRPRGERG LLAGLPLPIK DLSDVEGVLS TQGSKIFKDH IPARSDLMVE HLEANGAVIY
AKSNTPEFGA GANTFNELFG ATRNPWDLSR SAAGSSGGAA VALATGTAWL AQGTDMGGSL
RNPASFCGVV GMRPSIGRVA HTPAAKIDRT LGVAGPMARN VEDLALLLDA MSGEQQADPL
SLPSPRDSFR RAARYGAPPK RVAYSPDLGI TPVDPEVAAI TRKAALRFAD AGVAVELAHP
DLREAHECFQ VLRAFDFAIS KATLLRECRD QLKPEVVWNI EQGLKLTVDD LARAEAQRVA
MTARTLEFFQ TYDLLLTPAT IVAPYPIENR YVAECDGHSF DNYVEWLAIV YAITLVCCPA
LSLPCGFTAT GLPVGLQIVA PPRGEARLLA GARVLEDILG LRGSTPIDPR PAPSAGAHPA
QM
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