| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_1287 |
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| Symbol | |
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| ID | 3974005 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 1400398 |
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| End bp | 1401126 |
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| Gene Length | 729 bp |
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| Protein Length | 242 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637924397 |
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| Product | GntR family transcriptional regulator |
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| Protein accession | YP_531168 |
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| Protein GI | 90422798 |
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| COG category | [K] Transcription |
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| COG ID | [COG2188] Transcriptional regulators |
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| TIGRFAM ID | [TIGR02325] phosphonates metabolism transcriptional regulator PhnF |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACGACGT TAGACCAGGA CTCCGGCGTA GCGCTGTGGC GGCGGGTGGC CGATTCGATC
GAGCGCGGCA TCGCCGATGG CTCCTATCCC AACGGCGAGC GATTGCCGGG CGAGGTGGAG
ATTGCGGAGG CGCATCGCGT CAACCGCCAC ACCGTGCGCC GCGCCTTGGC GGCATTGGCC
GAGCGCGGGC TGGTGCGCGC CGCGCGCGGC AGCGGCACTT ATGTGCAGGC CTCCAAGCTT
TCCTATCCGC TGCACGCGCG CACGCGATTC TCCGAGATCG TCGGCGCCGG CGGCCGCGAG
CCGCGCGGAC AATTGATCGG CTCCAGCGAC GACATCGCCT CGCGCGATCT GGCGCGGCAG
CTCGGCGTCA AGCTGAATGC GCCCTTGGTG CGGCTGGAGA CGTTGCGCTT GGCCGATCGG
GTGCCGATCT GCGTCGGCAC CACCTGGCTG TCGGCGGCGC GCTTTCCCGA CGCCGCCGCG
ATCTATCAGC GCACCGGCTC GATGACCAAG ATGTTGGCGC ATTACGGCAT CCGCGACTAT
CGCCGCGGTG TGAGCCGGGT CACCGCCGGC ATCGTCGATG CGAGCGACGC GGGCCGGCTC
GATCTCGAAC TCGGCCGCCC GGTGCTGGTG GTCGACAGCA CCGACGTCGC GCCGGACGGC
GAACCGCTGC AGACCAAACA CTCCCGCTTC GCCGCCGACC GCGTCGAATT CGTCATCGAG
AACGAGTAG
|
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| Protein sequence | MTTLDQDSGV ALWRRVADSI ERGIADGSYP NGERLPGEVE IAEAHRVNRH TVRRALAALA
ERGLVRAARG SGTYVQASKL SYPLHARTRF SEIVGAGGRE PRGQLIGSSD DIASRDLARQ
LGVKLNAPLV RLETLRLADR VPICVGTTWL SAARFPDAAA IYQRTGSMTK MLAHYGIRDY
RRGVSRVTAG IVDASDAGRL DLELGRPVLV VDSTDVAPDG EPLQTKHSRF AADRVEFVIE
NE
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