| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_1110 |
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| Symbol | |
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| ID | 3969544 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 1212945 |
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| End bp | 1213472 |
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| Gene Length | 528 bp |
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| Protein Length | 175 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637924221 |
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| Product | lytic transglycosylase, catalytic |
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| Protein accession | YP_530993 |
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| Protein GI | 90422623 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.830854 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCAAACC ACGCCTGCGC CGGCGGGCCG TGCGAACGCC AGATGGCGTT GGCGGCCGGA
CGGCACGGCG TTCCGCTCGG CGTGTTGTAT TCGGTCGGCC TCAGCGAGAC CGGGCGCAAG
GGCGTGCTCA ATCCCTATGC GCTCAACGTC GACGGCAAGA CCGTGCTGGC CGCCGATCTT
CGAGGCGCCG TCAGTCGATT CACCGAGGCG AAGCGGAACG GCGCCAAGCT GGTCGATCTC
GGCTGCATGC AGATCAATCA CCGCTACCAC GCCGACAAGT TCGCCAGCGT CGAGGCGATG
TTCGATCCGG CGAAGAACGT CGACTACGCG GCGCGGTTTC TCAAGGAGCT GCGGGCGCGG
GAAGGCAATT GGACGATGGC GGTCGCGCGC TACAACGCAG GGCCCAGCAA CAAGATCGGA
CAACAACGCT ACGTCTGCGG CGTCATCGGA AGTCTGGTAG CGAGCGGCTT CGGGTCCTGG
ACCAGCCGGG CGCGAGCCTT TTGCAACGAC CGCACCGCAC TACGATAG
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| Protein sequence | MANHACAGGP CERQMALAAG RHGVPLGVLY SVGLSETGRK GVLNPYALNV DGKTVLAADL
RGAVSRFTEA KRNGAKLVDL GCMQINHRYH ADKFASVEAM FDPAKNVDYA ARFLKELRAR
EGNWTMAVAR YNAGPSNKIG QQRYVCGVIG SLVASGFGSW TSRARAFCND RTALR
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