Gene RPC_1066 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_1066 
Symbol 
ID3969578 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp1170053 
End bp1170817 
Gene Length765 bp 
Protein Length254 aa 
Translation table11 
GC content66% 
IMG OID637924177 
ProductABC transporter related 
Protein accessionYP_530949 
Protein GI90422579 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1122] ABC-type cobalt transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCTCC GATCGATCTT GGCCCGCGGT ATCGGCAAAA CCTCGGCGCC TGTCGTGCCG 
GCGCGGTTGG CTGCGGAGCA GGCCACACAG CGGATCGCTT TCGATCAGGT GTCGCTGACC
CGCGAGAATC GCGGCGTCCT GAACAACATT CATTTTTCCG CCGACGAGGC TCGGATCGGC
ATCCTCGGCG TCAATGGCTC GGGTAAGTCG ACGCTGCTGC GTCTGATGAT CGGCCTGGTC
ACCCCGTCGG GCGGGACCGT CACCGTCGAT GGCCTCAACC CGCGGCGCGA CGCCGTCACC
GTGCGCAACC GCACCGGCTT TATGTTTCAA ACCCCCGACA ACCAGATCGT CTGCCCGATC
GTCGAGGAAG ATCTGGCGTT CGGTCTGAAG GCGAGGGGGC TGACGCCCGA CGGCATCGCT
GCGCGGATCG AAGCCAGCCT GGTCCGCCTC GGCATCGCCG GTCTGGCGAA ACGCCGCGTC
CATGAACTCT CCGGCGGCGA ACGCCAATTG GTGGCGCTGG CCGGCGTGCT GACCCGGGCG
CCGACCACCA TCCTGTTCGA CGAGCCGACC TCGCAGCTCG ACCTCGCCAA CCGCAACCGG
TTTCAGCGGC TGCTCGCCGG CATGTCGGAG CAGGCGATCG TGGCGACCCA TGACCTCGAA
CTGGTCGAGG ATTTCGATCG CGTGCTGGTG ATCGATGGCG GCCGCCTCGT CGTCGATGCG
TTGCCGGCCG AAGCCGTCGC GCGCTATCGG GAGTTGTGCC AATGA
 
Protein sequence
MTLRSILARG IGKTSAPVVP ARLAAEQATQ RIAFDQVSLT RENRGVLNNI HFSADEARIG 
ILGVNGSGKS TLLRLMIGLV TPSGGTVTVD GLNPRRDAVT VRNRTGFMFQ TPDNQIVCPI
VEEDLAFGLK ARGLTPDGIA ARIEASLVRL GIAGLAKRRV HELSGGERQL VALAGVLTRA
PTTILFDEPT SQLDLANRNR FQRLLAGMSE QAIVATHDLE LVEDFDRVLV IDGGRLVVDA
LPAEAVARYR ELCQ