Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_0613 |
Symbol | |
ID | 3970684 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | + |
Start bp | 666616 |
End bp | 667173 |
Gene Length | 558 bp |
Protein Length | 185 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637923729 |
Product | HNH endonuclease |
Protein accession | YP_530505 |
Protein GI | 90422135 |
COG category | [V] Defense mechanisms |
COG ID | [COG1403] Restriction endonuclease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGAACGCAC ATGTCTCGCA CGGCGGTTGG CCGGTCTTGG TGTTGAACGC CGACTTCCGG CCGCTCAGTT ACTATCCGCT GTCTCTTTGG TCGTGGCAGG ACGCGATCAA GGCGGTGTTC CTCGACCGCG TCAATATCGT CGAGCACTAC GATCAAGCGG TGCACAGCCC ATCGTTCGAA ATTCAGCTGC CCAGCGTGGT ATCGCTGAAA TCCTTCGTCA AGCCGAGTAC CCACCCGGCC TTCACGCGGT TCAACGTGTT CCTGCGTGAT CGCTTCAGCT GTCAGTATTG CGGCGCGCCG GAGGACCTGA CCTTCGACCA CATCATGCCG CGCTCCAAGG GTGGCCAGAC CACCTGGGAA AACGTCGTCG CGGCGTGCTC GCCGTGCAAT TTGCGCAAGG GCAACATGAC GCCGCAGCAG GCGCGCATGT TCCCCAGGCA GGCGCCGTTC GCCCCCACGG TGCATCAGCT GCACCGCAAC GGCCGGCTGT TTCCGCCGAA CTACCTGCAC GACAGCTGGC TCGACTATTT GTATTGGGAC ACCGAGCTCG ATCCGTAG
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Protein sequence | MNAHVSHGGW PVLVLNADFR PLSYYPLSLW SWQDAIKAVF LDRVNIVEHY DQAVHSPSFE IQLPSVVSLK SFVKPSTHPA FTRFNVFLRD RFSCQYCGAP EDLTFDHIMP RSKGGQTTWE NVVAACSPCN LRKGNMTPQQ ARMFPRQAPF APTVHQLHRN GRLFPPNYLH DSWLDYLYWD TELDP
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