Gene RPC_0613 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_0613 
Symbol 
ID3970684 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp666616 
End bp667173 
Gene Length558 bp 
Protein Length185 aa 
Translation table11 
GC content62% 
IMG OID637923729 
ProductHNH endonuclease 
Protein accessionYP_530505 
Protein GI90422135 
COG category[V] Defense mechanisms 
COG ID[COG1403] Restriction endonuclease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAACGCAC ATGTCTCGCA CGGCGGTTGG CCGGTCTTGG TGTTGAACGC CGACTTCCGG 
CCGCTCAGTT ACTATCCGCT GTCTCTTTGG TCGTGGCAGG ACGCGATCAA GGCGGTGTTC
CTCGACCGCG TCAATATCGT CGAGCACTAC GATCAAGCGG TGCACAGCCC ATCGTTCGAA
ATTCAGCTGC CCAGCGTGGT ATCGCTGAAA TCCTTCGTCA AGCCGAGTAC CCACCCGGCC
TTCACGCGGT TCAACGTGTT CCTGCGTGAT CGCTTCAGCT GTCAGTATTG CGGCGCGCCG
GAGGACCTGA CCTTCGACCA CATCATGCCG CGCTCCAAGG GTGGCCAGAC CACCTGGGAA
AACGTCGTCG CGGCGTGCTC GCCGTGCAAT TTGCGCAAGG GCAACATGAC GCCGCAGCAG
GCGCGCATGT TCCCCAGGCA GGCGCCGTTC GCCCCCACGG TGCATCAGCT GCACCGCAAC
GGCCGGCTGT TTCCGCCGAA CTACCTGCAC GACAGCTGGC TCGACTATTT GTATTGGGAC
ACCGAGCTCG ATCCGTAG
 
Protein sequence
MNAHVSHGGW PVLVLNADFR PLSYYPLSLW SWQDAIKAVF LDRVNIVEHY DQAVHSPSFE 
IQLPSVVSLK SFVKPSTHPA FTRFNVFLRD RFSCQYCGAP EDLTFDHIMP RSKGGQTTWE
NVVAACSPCN LRKGNMTPQQ ARMFPRQAPF APTVHQLHRN GRLFPPNYLH DSWLDYLYWD
TELDP