Gene RPB_4126 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_4126 
Symbol 
ID3911934 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp4698103 
End bp4699140 
Gene Length1038 bp 
Protein Length345 aa 
Translation table11 
GC content68% 
IMG OID637886030 
Productsignal transduction histidine kinase 
Protein accessionYP_487729 
Protein GI86751233 
COG category[T] Signal transduction mechanisms 
COG ID[COG3920] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.583634 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCGAACC CCGCGGAGCC CGCACTGCAT CGCTTGAAAG TCTGGGACAT CATCCACGCC 
ACACGGCGGC TGCGGTCGCT GGGCTGGATC GGCGACCTCG TCGGCGTCGG CGCGGCCGCG
GCGGCGCTGG CGCTGCGCTT CGCCTTCGAT GCGGCGCTGC CGGCCGGGTT CCCCTATCTC
ACCTTCTTCC CCGCGGTGGT GCTGACTGCG TTCTTCTTCG GGCTGCGCCC CGGCATCGTC
TGCGCGGTGC TGAGCGGCCT GGCGTCATGG TACTTCTTCA TGCCGCCGTT CTACACGTTC
GAGCTGACGT CGCAGACCGC GATCGCGCTG GTGTTCTACG TCTTCATCGT CGCGGTCGAC
ATCGCGCTGA TCCACATCAT GCATCTGGCC GCCGCAAGGC TGCGCGCCGA CGCCGAGGAG
ACCGCGCGGC TGTACGAGCG GCAGCGCACG ATGTTCCAGG AGCTGCAGCA CCGCGTCGCC
AACAACATGC AGTTCGTCTC GGCGATGCTG CGGCTGTACG CTAAGCGCGC CGGCCAGGAT
CCCGCCGCGA TGCTGACCGC GCTCGACGAC GCCCGCGTCC GCCTCGACAC CATGTCGCGG
CTGCATCGCC ATCTCTACGA TCCGGTCAAC GTCACCCGCC CGGTCGGGGA GTTCTTCCAG
GAGCTGTGCG CCAACCTCGC CGAGGCCGCC GGCGCCAAAG ACGTTCGCTT CAGCATCGAC
ATGCCGCCGG TGCAGTTCGA TCTCGACCAA TTGACACCGC TGTCGCTGAT CGCGGTCGAG
GTGATCACCA ACGCGCTGAA ACACGCCTTC CCCGACGGTC GCGGCAGCAT CGCGCTGCGT
CTCGTGCAGC ACGGCGACCA CATCGTCTTC ACCATCGCGG ATGACGGCAA AGGGATGGCG
GCGAACCCCA ATCCCGAGCA GAGCAAGAGT CTCGGCCTGA AGATCGTCCA CAGCCTCGCC
ACCCAGCTCG GCGGCAGCAT CGTCTACGAG GTCGGGCCGG GCACCACCGC GCGCGTGGAA
TTCGACCGCG CCGCGTGA
 
Protein sequence
MPNPAEPALH RLKVWDIIHA TRRLRSLGWI GDLVGVGAAA AALALRFAFD AALPAGFPYL 
TFFPAVVLTA FFFGLRPGIV CAVLSGLASW YFFMPPFYTF ELTSQTAIAL VFYVFIVAVD
IALIHIMHLA AARLRADAEE TARLYERQRT MFQELQHRVA NNMQFVSAML RLYAKRAGQD
PAAMLTALDD ARVRLDTMSR LHRHLYDPVN VTRPVGEFFQ ELCANLAEAA GAKDVRFSID
MPPVQFDLDQ LTPLSLIAVE VITNALKHAF PDGRGSIALR LVQHGDHIVF TIADDGKGMA
ANPNPEQSKS LGLKIVHSLA TQLGGSIVYE VGPGTTARVE FDRAA