Gene RPB_3893 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_3893 
Symbol 
ID3911697 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp4448809 
End bp4449285 
Gene Length477 bp 
Protein Length158 aa 
Translation table11 
GC content62% 
IMG OID637885794 
ProductMarR family transcriptional regulator 
Protein accessionYP_487497 
Protein GI86751001 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.811485 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGACCA GGAGCGACGT GATGAAGAAG AGAATCCGGG CCGACGACAG CCGGTTTCTC 
TCCAACCGCT CGCCGTTCTT CCACAATGTC CGGATGCTGG CGCGCTATTC GGCGCGGATG
AACGCCATCC TCAAGCCGGC CGGCCTCGAC GTGCCGAAAT GGCGGGTTCT GATGCTGCTG
GTCGAGGGAC GGCCGCTCAC GGTGTCGCAG ATCGCCGACG AGGCGGTGGT CAACATCTCG
ACCATGGCCA AGATCATCAA CCGGATGACC GACGACGGGT TGGTGACCAC CCGGACCTCG
AGCACCGACG CCCGATCCAC CGATGTGTTC ATCACCGAAC AGGGCGAGCG CGTGCTCGAA
CTGGTGCGCG AGAAGGTGAG TTATCTGTTC AAGGAAGCGC TGCGCGGCCT CACCAAGGCC
GAGGTGCAAC TCCTCAACAC GTTGTCCGTC AAGATTTACG ACAACCTGTC GCCGTAG
 
Protein sequence
MQTRSDVMKK RIRADDSRFL SNRSPFFHNV RMLARYSARM NAILKPAGLD VPKWRVLMLL 
VEGRPLTVSQ IADEAVVNIS TMAKIINRMT DDGLVTTRTS STDARSTDVF ITEQGERVLE
LVREKVSYLF KEALRGLTKA EVQLLNTLSV KIYDNLSP