Gene RPB_3851 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_3851 
Symbol 
ID3911655 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp4403661 
End bp4404719 
Gene Length1059 bp 
Protein Length352 aa 
Translation table11 
GC content67% 
IMG OID637885752 
Producthypothetical protein 
Protein accessionYP_487455 
Protein GI86750959 
COG category[S] Function unknown 
COG ID[COG3181] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCAGA TTCGAGCAAG CGACGCAGCC GAGATGCGGA CATGTCGAGG GGATAACCTG 
GGACGACTGC TGCACAGGGC GTGTTTCGGC CTGCTCGTCG CTGCGATCTT GGCGACGCCC
TCGGGGGCCG GGCCGGCCTA TCCGGTGCGG GCCATCACGG TGATCGTACC GTTCGCCGCC
GGGGGGCCGA CCGACATCGT CACCCATATC GTCACCGACC ATCTGGCAAA GCGGCTCGGG
CAGCAGATCA TCGTCGAAAA CGTCGTCGGC GCCGGTGGTA CTACTGCGGC AATCCGCGCG
ACGCGCGCCG CTCCGGATGG CTACACGCTG CTGATGGGGC ACATGGGAAC TCACGGCAGC
GCGCTCGCGG CATACCCGCA ACTGGTCTAC GATCCCGTCA CGGACTTCAC GCCGATCGGG
CTGGTGGTGA GAACGCCGGT TCTCGTGGTC GTCCGGCGCG GCCTGCCAGT GCACGATCTC
GCTGATCTGG TGCGCTATTC GAGCAAGCAC GGCAAAGCTA TCACGATGGC ACACGCCGGT
TTCGGCTCGA TCTCCCATGC GACCTGCACG CTGTTCAACA CGATCGGCGA CATTCATCCC
GCAACGCAGG CGTTTCAGGG CACCGGCCCG GCACTGAAGG CGCTCATCGC CGGACGCGTC
GACTATATGT GTGATCAGAT CGTCGGCGCG GCGCCGCGCG TCGGAACCGG AGAGGTGAAG
GCGCTGGCGA TCTCCTCGGG CCGGCGAAGT CCGATCCTGC CGGACGTCCC GACCTCCGCC
GAAGCCGGCT TCCCCGATTT CGAAATCTCA GCCTGGAGCG CGCTGTTCGC GCCGAAAGCA
ACGCCGCAGC ACATCGTCGA TGGACTCAAC GCCGCGTTGG CTCACGCGCT CGACGATCCC
GAGGTCCGCC AGGCGCTGGG CAGTCTCGGC GGCGAAATCC CGCTCGCAGA CGAGCGCAGC
GCGTCCACGC TCGCCACGCT GATCGAACGC GAAGCCACGC GATGGCGGTC GCTGTCCCGA
CCGGCCGCCG TATTGGACGG TTCGCGGGTA CGGCAATGA
 
Protein sequence
MNQIRASDAA EMRTCRGDNL GRLLHRACFG LLVAAILATP SGAGPAYPVR AITVIVPFAA 
GGPTDIVTHI VTDHLAKRLG QQIIVENVVG AGGTTAAIRA TRAAPDGYTL LMGHMGTHGS
ALAAYPQLVY DPVTDFTPIG LVVRTPVLVV VRRGLPVHDL ADLVRYSSKH GKAITMAHAG
FGSISHATCT LFNTIGDIHP ATQAFQGTGP ALKALIAGRV DYMCDQIVGA APRVGTGEVK
ALAISSGRRS PILPDVPTSA EAGFPDFEIS AWSALFAPKA TPQHIVDGLN AALAHALDDP
EVRQALGSLG GEIPLADERS ASTLATLIER EATRWRSLSR PAAVLDGSRV RQ