| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_3847 |
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| Symbol | |
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| ID | 3911651 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | + |
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| Start bp | 4398972 |
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| End bp | 4400576 |
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| Gene Length | 1605 bp |
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| Protein Length | 534 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637885748 |
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| Product | glucose-methanol-choline oxidoreductase |
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| Protein accession | YP_487451 |
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| Protein GI | 86750955 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.917916 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGGACA CCTATGACTT TGTCGTGGTC GGCGGCGGCT CGGGCGGCTG CGCGGTCGCA
GGAAGGCTGT CGGAAGATCC CGGCACGTCG GTGGCTTTGC TGGAAGCCGG CGGCACCGCC
GACAATTGGG TGGTGAAGAC ACCCTATGCG CTGTCGCTGA TGGTGCCGAG CAAACTCAAC
AACTGGCACT TCGAGACGGT GCCGCAGCCC GGCCTCAACG GCCGGATCGG CTATCAGCCG
CGCGGCAAGG GGCTCGGCGG ATCGTCGGCG ATCAACGCCA TGGTCTACAT TCGCGGCCAT
CAATGGGACT ATGACCACTG GGCCGAACTC GGCGCCACCG GCTGGTCCTA TGCCGACGTG
CTGCCGTATT TCAAACGTTC GGAGAGCAAT TCCGATTTCA ACGGCGCGTA TCACGGCCAG
AGCGGCCCGC TGCACGTCAA CAAACTCCGC ACCGACAATC CGGTGCACGA GATCTTCCTG
CAGGCGGCGC GCGAGGCGCA ATTCCGCATT CGCGACGATT TCAACGGCGA GGAGCAGGAA
GGCCTCGGCC TGTATCAGCT CACCCAGCAC AATGGCGAGC GCTGGAGCGC GGCCCGCGCC
TATGTGCATC CCTACATGGC GACGCGGCCC AATCTGCGCG TCGAGACGCA GGCGCAGGCC
ACCCGCATCC TGTTCGAGGG CGGTCGCGCG GTCGGCGTCG AATATCGCCA GAACGACGAA
GCCCGGCAGA TCCGCGCGCG GCGCGAAGTC ATCGTCGCGT CCGGCGCGTT CCAGTCGCCG
CAACTGCTGA TGCTGTCCGG CATCGGCGAC GCCGCCACGC TGCAGCAGCA CGGCATCGCG
CCGACGCATC ATCTGCCCGG CGTCGGGCAG AATTTGCAGG ATCACCCCGA CTTCATCTTC
GCCTATCAAT CCGACAGCCC ATATTTCACC GGCACCAGCT TCACCGGCAT CGGCCGGTTG
CTGTCGCGGA TCGGCCAGTA CCGCCGCGAG GGCCGCGGCC CGCTCACGAC CAACTTCGCC
GAATGCGGCG GCTTCCTGAA AACGCGACCG GACCTCGACG TGCCCGACGT GCAGTTGCAT
TTCGGCATGG CGATGGTCGA CGACCACGGC CGCAAACGGC GCTGGGGCAC GGGCTTTTCC
TGCCATGTCT GCCTGCTGCG GCCGAAAAGC CGCGGCAGCG TCGGCCTCGC AAGCGCCGAT
CCGCTGGCGC CGCCGCTGAT CGACCCCAAC TTTCTCGGCG AGGCGGACGA TCTCGAGGCG
ATGGTCGCAG GCTACAAGAC CACGCGGCGG TTGATGGAAG CCCCCGCGCT CCGCGCGCTG
CAGCAGAAGG ATCTGTTCAC CGCCGACGTC CGCACCGATG ACGACATCCG CGCCATCCTG
CGCGCCCGCG TCGACACCGT GTATCACCCG GTCGGCACCT GCAGGATGGG CAGCGATCCG
ATGGCGGTGG TCGATCCGCA GCTTCGTGTG CACGGAATCG GCGGGCTGCG CATCGTCGAC
GCCTCGGTCA TGCCGACCCT GATCGGCGGC AACACCAACG CGCCGACGAT CATGATCGGC
GAGAAGGCCG CGGACATGAT CCGGGAGGAG ATCCGGGCGA ACTGA
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| Protein sequence | MTDTYDFVVV GGGSGGCAVA GRLSEDPGTS VALLEAGGTA DNWVVKTPYA LSLMVPSKLN
NWHFETVPQP GLNGRIGYQP RGKGLGGSSA INAMVYIRGH QWDYDHWAEL GATGWSYADV
LPYFKRSESN SDFNGAYHGQ SGPLHVNKLR TDNPVHEIFL QAAREAQFRI RDDFNGEEQE
GLGLYQLTQH NGERWSAARA YVHPYMATRP NLRVETQAQA TRILFEGGRA VGVEYRQNDE
ARQIRARREV IVASGAFQSP QLLMLSGIGD AATLQQHGIA PTHHLPGVGQ NLQDHPDFIF
AYQSDSPYFT GTSFTGIGRL LSRIGQYRRE GRGPLTTNFA ECGGFLKTRP DLDVPDVQLH
FGMAMVDDHG RKRRWGTGFS CHVCLLRPKS RGSVGLASAD PLAPPLIDPN FLGEADDLEA
MVAGYKTTRR LMEAPALRAL QQKDLFTADV RTDDDIRAIL RARVDTVYHP VGTCRMGSDP
MAVVDPQLRV HGIGGLRIVD ASVMPTLIGG NTNAPTIMIG EKAADMIREE IRAN
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