Gene RPB_3827 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_3827 
Symbol 
ID3911630 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp4371215 
End bp4371610 
Gene Length396 bp 
Protein Length131 aa 
Translation table11 
GC content65% 
IMG OID637885727 
Producthypothetical protein 
Protein accessionYP_487431 
Protein GI86750935 
COG category[S] Function unknown 
COG ID[COG1598] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.539898 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTCATT ACATCGCGCT GATCCACAAA GACCCCGACA GCGACTACGG CGTGTCGTTT 
CCGGATCTGC CGGGCGCTAT CAGCGCCGGC CGCACCCTCG ACGAGGCGCG CGACATGGCG
GCGGAAGCGC TGGCGCTGCA TCTCGAAGGC ATGGCGGAGG ACGGCGAGGC GGTCCCGGAA
CCGTCGACGC TGGAGAAGAT CATGCAGGAC CCGCAAAATC GCGACGGCGT CGCAGTGCTG
ATCCCGGTGA CGCCACAGGC GGTGCGCTCG GTGCGAATCA ACATCACGCT ACCCTCCGAT
CTGCTCGCGC AGATCGACGA ACATGCCGAG CGCGAGGGCT TCACCCGCTC CGGCTTCCTG
GCCCAGGCGG CGAAAAAGAC GATGACTACG GCGTAA
 
Protein sequence
MVHYIALIHK DPDSDYGVSF PDLPGAISAG RTLDEARDMA AEALALHLEG MAEDGEAVPE 
PSTLEKIMQD PQNRDGVAVL IPVTPQAVRS VRINITLPSD LLAQIDEHAE REGFTRSGFL
AQAAKKTMTT A