| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_3615 |
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| Symbol | |
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| ID | 3911417 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | + |
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| Start bp | 4150408 |
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| End bp | 4151622 |
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| Gene Length | 1215 bp |
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| Protein Length | 404 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637885517 |
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| Product | urea/short-chain binding protein of ABC transporter |
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| Protein accession | YP_487221 |
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| Protein GI | 86750725 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.489489 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.574773 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCGCA CCAAGAGCCT TCTGGGCCTC GCACTCTCGT GCCTGCTCTG CAGCACCGCC
AACGCCGAGA TTTCCGGCAA TGTCGTGCGC GTCGGCGTGC TCAACGACAT CTCCGGCATC
TTCCAGGACA CCAACGGCAT GGGCTCGGTC GAAGCCGCAC GCATGGCCGC GGAGGACTTC
GCCGGCGGCG GCAAGAACGT CAAAGTCGAG ATCATCTATG CCGACCACCA GAACAAGGCC
GACGTCGGCA ACGCGATCGC GCGCCGCTGG CTCGACAATG AGGGCGTGGA TGCGATCGTC
GACGTGCCGA ATTCCTCGGT GGGCCTGTCG ATCAACACGC TGCTGCGCGA CACCAAGATG
ACGTTCCTGG CGTCGTCGAC CGCGAGCTCG GACCTCACAG GCAAGGCCTG CTCGCCGAAC
ACGATTCAGT GGGTCAACGA CACCTGGGCC ACCGGCAACA CCACCGCGGC GGCGATGATC
GGCCGCGGCG GCAAGGACTG GTACTTCATC ACGGTCGACT ACGCGCTCGG CAAGGGCATC
GAGGCCGAAG CCACCAAGTA CATCGAGGCC CATGGCGGCA AGGTGGTCGG TTCGAGCAAG
CACCCGCTCG GCACCTCGGA TTTCGCCTCG TTCCTGCTGC AGGCGCAGGG CTCGAAAGCC
GGTGTGATCG GCCTCGCCAA TGCCGGCGGC GACACCATCA ACACCGTCAA ACAGGCCGCC
GAATTCGGCA TTCAGCAGAG CGGCCAGAAG CTGGTCGCGT TCCTGCTGTT CATCAACGAC
GTCCACGGCA TGGGCCTGAA GGTGGCGCAA GGCCTGCAAT TGATGGAGGC GTTCTACTGG
GACATGAACG ACGACACCCG CGCCTTCGCC AAGCGCTTCG CGGCGCGCCC CGGCATGAAC
GGCAAGATGC CGAGCGGCAA CCAGGCCGGC GTCTACGCCT CCACGCTCGC GTATCTCAAC
GCCGTCGCCG CGACCGGGAG CGACGACGCC AAGCAGGTCG TTCCGCAAAT GAAGAAATTC
TCCGGCAAGG ACAAACTGTT CGGCGACGTC ACCATTCGCC AGGACGGCCG TGTGGTTCAC
CCGATGTATC TGTTCGAGGT GAAGAAGCCC GCCGACTCGA AGTATCCCTA CGATTACTAC
ACGCTGGTCT CGACCATCCC CGCCGACAAG GCGTTCCGAC CGCTGAAGGA CGGCGAGTGT
TCGCTGGTGA AATAG
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| Protein sequence | MNRTKSLLGL ALSCLLCSTA NAEISGNVVR VGVLNDISGI FQDTNGMGSV EAARMAAEDF
AGGGKNVKVE IIYADHQNKA DVGNAIARRW LDNEGVDAIV DVPNSSVGLS INTLLRDTKM
TFLASSTASS DLTGKACSPN TIQWVNDTWA TGNTTAAAMI GRGGKDWYFI TVDYALGKGI
EAEATKYIEA HGGKVVGSSK HPLGTSDFAS FLLQAQGSKA GVIGLANAGG DTINTVKQAA
EFGIQQSGQK LVAFLLFIND VHGMGLKVAQ GLQLMEAFYW DMNDDTRAFA KRFAARPGMN
GKMPSGNQAG VYASTLAYLN AVAATGSDDA KQVVPQMKKF SGKDKLFGDV TIRQDGRVVH
PMYLFEVKKP ADSKYPYDYY TLVSTIPADK AFRPLKDGEC SLVK
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