| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_3421 |
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| Symbol | |
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| ID | 3911223 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 3909724 |
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| End bp | 3910479 |
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| Gene Length | 756 bp |
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| Protein Length | 251 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637885324 |
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| Product | pyrroloquinoline quinone biosynthesis protein PqqC |
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| Protein accession | YP_487028 |
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| Protein GI | 86750532 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG5424] Pyrroloquinoline quinone (Coenzyme PQQ) biosynthesis protein C |
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| TIGRFAM ID | [TIGR02111] coenzyme PQQ biosynthesis protein C |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0157933 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.705605 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACCGCGT TTTCGATCAA CGGCGCAGCC CCGCTCGCGA GCGCCGGCGA ATTGGAAGCC
GCGCTGCGGA TGATCGGCGC CACGCGCTAT CACAATCTGC ATCCGTTTCA CCGGTTGCTG
CACGGCGGCA AGCTCAACAA GGGCCAGGTG CAGGCCTGGG CTCTGAATCG CTATTACTAC
CAGAGCACGA TCCCGATCAA GGACGCGGTG GTGATCTCGC GCTTCCGCGA CCGCGCCACC
CGCGTCGAAT GGCGGCACCG GATCGAGGAT CACGACGGCG ATATCGGCAG CGAGGGCGGC
ATCGAACGCT GGCTGAAGCT GACCGAGGGC CTCGGCCTCG ACAGCGCTTA TGTGGAGTCG
ACCCAGGGAA TTCTCCCGGC GACCCGCTTT GCCGTTGACG CCTACGTGCA TTTCGTCCGC
GACCGTACGC CGCTGGAAGC GATCGCGTCG TCACTGACCG AGCTGTTCGC GCCGAACCTG
CACGAGGAAC GCATCGCCGG CATGCTGGCG CATTACGACT TCGTCAATCC GGAGATCATG
AGCTACTTCA AGCGCCGGCT GACGCAGGCG CCGCGCGACG CCGATTTCGC GCTGGATTAC
GTCAAGCGCT ACGCCGGCAC GCCGGCGGAG CGCGAAGCCG TGTGCAATGC GCTGATCTTC
AAGACCAACG TGCTGTGGGC GCAGCTCGAC GCGCTGCATC ACGCCTATGT CGACGGCCAC
ATCCCGCCCG GCGCCTTCGT GCCGCAGGGC GGGTGA
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| Protein sequence | MTAFSINGAA PLASAGELEA ALRMIGATRY HNLHPFHRLL HGGKLNKGQV QAWALNRYYY
QSTIPIKDAV VISRFRDRAT RVEWRHRIED HDGDIGSEGG IERWLKLTEG LGLDSAYVES
TQGILPATRF AVDAYVHFVR DRTPLEAIAS SLTELFAPNL HEERIAGMLA HYDFVNPEIM
SYFKRRLTQA PRDADFALDY VKRYAGTPAE REAVCNALIF KTNVLWAQLD ALHHAYVDGH
IPPGAFVPQG G
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