| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_3317 |
|---|
| Symbol | |
|---|
| ID | 3911118 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris HaA2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007778 |
|---|
| Strand | + |
|---|
| Start bp | 3795808 |
|---|
| End bp | 3796266 |
|---|
| Gene Length | 459 bp |
|---|
| Protein Length | 152 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 637885219 |
|---|
| Product | response regulator receiver domain-containing protein |
|---|
| Protein accession | YP_486924 |
|---|
| Protein GI | 86750428 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.147555 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.138584 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGTAT TGCTAGTTGA GGACGAGGAG CACAAGGCCA ATGACTTGAC GGCTCGACTC
TACAAACTTG GTATCGCGAA ACACGACTTG ACAACGGTGA GCGGCGTGCG ACACGCCGTG
CTTCATGTGA CGGAAGGCCA CTTCTCATTG ATCATCGTGG ATATGGCACT ACCCACTTTT
TCGGACATTT CTAGTGAAGG AAGCGGAGGC GGCGACGCCC AAGCGGTAGG AGGCATAGAA
GTATTGCGGG CCCTTTTCGC AGCCGGCGTC AGCAGCACGA TCATCATCGT CACCCAATAT
CCCGACATTA TCGTGAGCGG AACTAGGGTT CGACTTACGA GCGCAGCGCG GGTTCTTTCC
AAAAAATACA AACAGAACGT TCTCGGCGCT GTGTTGTATT CATATAAGAG CCCTGATTGG
GAGACGGCAT TCGACACGTT GGTCAGGAAA GCACAATGA
|
|---|
| Protein sequence | MKVLLVEDEE HKANDLTARL YKLGIAKHDL TTVSGVRHAV LHVTEGHFSL IIVDMALPTF
SDISSEGSGG GDAQAVGGIE VLRALFAAGV SSTIIIVTQY PDIIVSGTRV RLTSAARVLS
KKYKQNVLGA VLYSYKSPDW ETAFDTLVRK AQ
|
|---|
| |