17 homologs were found in PanDaTox collection
for query gene RPB_3317 on replicon NC_007778
Organism: Rhodopseudomonas palustris HaA2



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_007778  RPB_3317  response regulator receiver domain-containing protein  100 
 
 		 152 aa  306  5e-83  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.147555  normal  0.138584 
 
 
-
 
NC_007802  Jann_1533  response regulator receiver domain-containing protein  33.33 
 
 		 149 aa  72.4  0.000000000002  Jannaschia sp. CCS1  Bacteria  normal  0.0503876  normal  0.244414 
 
 
-
 
NC_009622  Smed_6521  response regulator receiver protein  27.81 
 
 		 151 aa  55.5  0.0000002  Sinorhizobium medicae WSM419  Bacteria  normal  0.557152  normal  0.106404 
 
 
-
 
NC_010498  EcSMS35_0302  response regulator  26.17 
 
 		 149 aa  54.7  0.0000004  Escherichia coli SMS-3-5  Bacteria  normal  0.0396154  decreased coverage  0.00000818495 
 
 
-
 
NC_007614  Nmul_A0543  response regulator receiver domain-containing protein  23.33 
 
 		 162 aa  52.4  0.000002  Nitrosospira multiformis ATCC 25196  Bacteria  normal  1  n/a   
 
 
-
 
NC_009665  Shew185_3243  response regulator receiver protein  25.35 
 
 		 146 aa  48.9  0.00003  Shewanella baltica OS185  Bacteria  normal  1  n/a   
 
 
-
 
NC_008061  Bcen_4626  response regulator receiver protein  18.92 
 
 		 150 aa  45.1  0.0003  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.716326  n/a   
 
 
-
 
NC_008543  Bcen2424_3738  response regulator receiver protein  18.92 
 
 		 150 aa  45.1  0.0003  Burkholderia cenocepacia HI2424  Bacteria  normal  0.174307  normal  0.0184416 
 
 
-
 
NC_007778  RPB_3318  response regulator receiver domain-containing protein  24.68 
 
 		 379 aa  45.1  0.0004  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.625003  normal  0.154296 
 
 
-
 
NC_014148  Plim_1100  response regulator receiver domain-containing protein  25.32 
 
 		 154 aa  42.7  0.002  Planctomyces limnophilus DSM 3776  Bacteria  normal  1  n/a   
 
 
-
 
NC_011370  Rleg2_6155  response regulator receiver protein  26.71 
 
 		 151 aa  42.7  0.002  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.831592  normal  1 
 
 
-
 
NC_010322  PputGB1_1947  two component transcriptional regulator  31.63 
 
 		 222 aa  41.6  0.004  Pseudomonas putida GB-1  Bacteria  normal  0.421076  normal  0.0119241 
 
 
-
 
NC_009622  Smed_6520  response regulator receiver protein  29.91 
 
 		 406 aa  41.2  0.005  Sinorhizobium medicae WSM419  Bacteria  normal  0.143497  normal  0.120873 
 
 
-
 
NC_008322  Shewmr7_2150  two component transcriptional regulator  31.07 
 
 		 219 aa  40.8  0.007  Shewanella sp. MR-7  Bacteria  hitchhiker  0.00200664  normal  0.32319 
 
 
-
 
NC_008321  Shewmr4_1827  two component transcriptional regulator  31.07 
 
 		 219 aa  40.8  0.007  Shewanella sp. MR-4  Bacteria  hitchhiker  0.00738443  normal  1 
 
 
-
 
NC_007908  Rfer_0247  two component, sigma54 specific, Fis family transcriptional regulator  28.16 
 
 		 467 aa  40.8  0.007  Rhodoferax ferrireducens T118  Bacteria  normal  1  n/a   
 
 
-
 
NC_008463  PA14_49180  two-component response regulator PhoP  30.61 
 
 		 225 aa  40  0.01  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  1  hitchhiker  0.000831037 
 
 
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