Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_3263 |
Symbol | |
ID | 3911064 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | - |
Start bp | 3733266 |
End bp | 3734090 |
Gene Length | 825 bp |
Protein Length | 274 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637885165 |
Product | AraC family transcriptional regulator |
Protein accession | YP_486870 |
Protein GI | 86750374 |
COG category | [K] Transcription |
COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.534649 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.60166 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGACG ACGAATGTCC GGATGCCGGA CGCCTGATGC TGATCAGCCC TGAACGCGTC TTTTACGCCG GCCTGCTGGG CCGCCCGCGG CGGCGGAGCA TCGGCGGCTT TTCCGTCTAT GTTGCGCTGC AAGGTGAGTT GCGGGTCGCG ATCGAGGGCC GGCCTTTGCA GGCCGGCGCG ATGGTCTATG TGCCGCCCTA TCTCACGCAC AACGTGGAAG GCGACTGTCG CTCGGTGATT GTTCTGGTGA TCGAGCCGGA GAGCGTCCTC GACGGGCCGA TGGCGGCGCT CGGCACACGG ATCGCAGGCG CTGGCGCCGG GCCGCTCGCG GGCCGGATCA GGCGGGCCTA TCAGACGCTG GTCGCAACAG GCCGGCGCGA GGGCTTCACC ACTTCGGAAT TCGACGATCT GTTCTTCGGC GAATCGCTGC CGGCGCGCAG GATCGACCGC CGCATCGCCG GCGCGATCGC GAGGCTGAAC GACGTCTCCG GCGCGGCCGT CACCGCGGAG GATTGCGCCG CCACCGCGAA CCTCTCGCAG TCGCGCTTCC TGCATCTGTT CAAGGACGAG ACCGGCGTCT CTTTCCGCGC GCTACGCGCC TGGAAGCGGG CGCGGCACCT GCTGCACTTC GTCAACGCCG AGATCAACCT CGCGCATCTG GCGCAGGACA TCGGCTATCC GGATTCGACC CACTTCAGCC ATTCGATCCG GCGCTTCTAC GGGCTGCAGC CGCGCGCGAT CTTCTCCGGC TCGCGCGATC TGGCGATCTG GCGCAGCGAT CCGCATGGCG CCGGCGTCGC GGAATTTCGG CAGGGGCGGC CTTAG
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Protein sequence | MSDDECPDAG RLMLISPERV FYAGLLGRPR RRSIGGFSVY VALQGELRVA IEGRPLQAGA MVYVPPYLTH NVEGDCRSVI VLVIEPESVL DGPMAALGTR IAGAGAGPLA GRIRRAYQTL VATGRREGFT TSEFDDLFFG ESLPARRIDR RIAGAIARLN DVSGAAVTAE DCAATANLSQ SRFLHLFKDE TGVSFRALRA WKRARHLLHF VNAEINLAHL AQDIGYPDST HFSHSIRRFY GLQPRAIFSG SRDLAIWRSD PHGAGVAEFR QGRP
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