| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_2560 |
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| Symbol | |
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| ID | 3910349 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | + |
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| Start bp | 2936181 |
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| End bp | 2937740 |
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| Gene Length | 1560 bp |
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| Protein Length | 519 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637884457 |
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| Product | hypothetical protein |
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| Protein accession | YP_486174 |
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| Protein GI | 86749678 |
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| COG category | [G] Carbohydrate transport and metabolism
[S] Function unknown |
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| COG ID | [COG0062] Uncharacterized conserved protein
[COG0063] Predicted sugar kinase |
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| TIGRFAM ID | [TIGR00196] yjeF C-terminal region, hydroxyethylthiazole kinase-related
[TIGR00197] yjeF N-terminal region |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.40713 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGTGGGCGC GTTCTGGGGC CTGCTGCCTC AGTGTGAGGC GAGAGTACTG GGAATTGGGC
ATGGAGCTAC TGACGCCCGC TGAAATGGAC CGCGCGGACC TGCTCACGAT CGCCTGGGGA
TCGTCCGGCT TCGCCTTGAT GCTGCATGCC GGCCGGCATG TCGCGCAGGC TGCGATCGAG
CTGGCGGAAA CCGGACCGAT CCTGGTGATC GCCGGTCCCG GCAACAATGG CGGCGACGGT
TTGATCGCGG CCACCGAGCT GGTGGCGCTC GGCCGCACCG TGCACGTCAT GTTGCTCGGC
GAGCGCGACG CGCTGAAAGG CGATGCGGCG CTGGCGGCGC GGGAGTGGAA GGGGCCGCTG
CTGCCGTTCC TGCCACAGTC GATCGGGACG CCGTCTCTGA TCATCGACGC GCTGTTCGGC
TCCGGCCTCA ATCGGCCGGT GAAGGATCAG GCGCTGGAGA TGATCGAGGC GGTCAACGCC
ACCGGCGTGC CGGTGCTGGC CGTCGATCTG CCGAGCGGCA TCAACGGCGC CACCGGCGCG
GTGATGGGCG CCGCGATCAG GGCACGTGAG ACGGTGACGT TCTTCCGCCG CAAGCCCGGG
CATCTGCTGG TGCCGGGGCG GCTGTATTGC GGCAAGCTGA AGGTCGCCGA CATCGGCATC
GATCCGGCGG TGCTCGACGA GATCAAGCCG CAGGCGTTCG AGAACGATCC GAATCTGTGG
CTGCCGCATT TCCCGGTGCC GCGCGCCGAC GGCCACAAAT ACGGCCGCGG CCATGCCGTG
GTGATCTCCG GCGAACTGTC GCAGACCGGC GCGGCGCGGC TGGCGGCCCG CGGGGCGTTG
CGGGCCGGTG CGGGGCTGGT GACGCTGGCG TCACCGTGCG ATGCGCTCGC GGTGAATGCC
ACGGCGCTGA CCGCCGTGAT GGTCCGAGCG ATCGATACGC CGGACCAATT GGCGGGAATG
CTGGCCGACC GCCGTTTCAA TGCCGTCGGC GTCGGGCCCG GCGCGGGCAT CGACGACCGC
ACCCGCGGCA ACGTGCTGGC GGCGCTGGCG GCGGGCGCCG GCACGGTGCT CGATGCCGAC
GCGCTGACGG TGTTCGCAGG TGCCCCCGAG ACGCTGTTCG AGGCGATCAA ATCCGGCGCC
AATCCACAGG TTGTCCTCAC CCCGCACGAG GGCGAATTCC CTCGCTTGTT CAGTGATATG
AGCAACAAAA ATCCACTTCG CTCGAAACTC GAACGGGTCC GCGTAGCTGC GCAACGTTCG
GGGGCCGTGG TGTTGCTCAA GGGCCCGGAC ACGGTGGTCG CCTCACCGGA CGGCCGCGCG
GCGATCGCCT TCAACGCGCC GCCCTGGCTG GCGACGGCGG GCTCCGGAGA CGTGCTGACA
GGCATCATCA CCGGATTGCT GGCACAGCGG GTGGCGGCGT TCGAGGCGGC CTGCATCGGC
GTGTGGATGC ACGGTGAGGC GGCCTGCGAG GCTGGGCCCG GCCTGATCGC CGAGGACCTG
ACCGAGACGC TGCCGGCGGT GATCCGGCGG GTCTATGACG AACTCGGCAT CGAGTACTGA
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| Protein sequence | MWARSGACCL SVRREYWELG MELLTPAEMD RADLLTIAWG SSGFALMLHA GRHVAQAAIE
LAETGPILVI AGPGNNGGDG LIAATELVAL GRTVHVMLLG ERDALKGDAA LAAREWKGPL
LPFLPQSIGT PSLIIDALFG SGLNRPVKDQ ALEMIEAVNA TGVPVLAVDL PSGINGATGA
VMGAAIRARE TVTFFRRKPG HLLVPGRLYC GKLKVADIGI DPAVLDEIKP QAFENDPNLW
LPHFPVPRAD GHKYGRGHAV VISGELSQTG AARLAARGAL RAGAGLVTLA SPCDALAVNA
TALTAVMVRA IDTPDQLAGM LADRRFNAVG VGPGAGIDDR TRGNVLAALA AGAGTVLDAD
ALTVFAGAPE TLFEAIKSGA NPQVVLTPHE GEFPRLFSDM SNKNPLRSKL ERVRVAAQRS
GAVVLLKGPD TVVASPDGRA AIAFNAPPWL ATAGSGDVLT GIITGLLAQR VAAFEAACIG
VWMHGEAACE AGPGLIAEDL TETLPAVIRR VYDELGIEY
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