Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_2274 |
Symbol | |
ID | 3909655 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | + |
Start bp | 2624513 |
End bp | 2625226 |
Gene Length | 714 bp |
Protein Length | 237 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637884171 |
Product | ABC transporter related |
Protein accession | YP_485890 |
Protein GI | 86749394 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0410] ABC-type branched-chain amino acid transport systems, ATPase component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.631731 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.801014 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCCGCAG CACGTCTTGA AGTCGAGCGC CTGAGCGCCG GCTATGGTTC AGTCGGCATC CTGAGCGAGA TGAGTCTGGT CGTGCCGGCC GGCGGCCGAT TGACCGTGCT CGGGCGCAAC GGCGTCGGCA AGACCACGCT GCTCGCCACG ATCATGGGCC TGACGTCGCA CCAGGGCGGT GTGATCCGCG TCGACGATCG CGATGTGACG GGACTGAAGA CCTACGCCCG TGCCGCCGCG GGCCTCGGCT ACGTGCCGCA GACGCGCGAC GTGTTCCGGT CGCTGACGGT CGAGGAAAAT CTCTTCACCG GCCTCAAGGG CCGGCCGCGC TCCGAGCTCG ACGAGGTCTA CACGATTTTT CCGCGGCTCG CCGAGCGGCG GCATCACAAC GGCGCCCAAT TGTCGGGCGG CGAGCAGCAG ATGCTGTCGC TGGCGCGCAC GCTGCTGGGC AAGCCGTCGG TGCTGCTGCT GGACGAACCG CTCGAAGGGC TCGCCCCGGT GATTTGCGAC CGGTTGATGG AAACGATCGT CGACCTGGCG CAGTCCGGAG AAATGACCGT GGTTCTGGTC GAGCAGCAGA TCGAGCGGGC GCTCGATTTC GCCGACGACG TGATCGTCAT CGAGCGTGGC CGGATCGCCT GGAGCGGGCG GACCGAACGC CTGCGTGGCG AGCGGGAACT GGTCGACGCC CTGCTCGGCG TCGGGATCGG GTGA
|
Protein sequence | MPAARLEVER LSAGYGSVGI LSEMSLVVPA GGRLTVLGRN GVGKTTLLAT IMGLTSHQGG VIRVDDRDVT GLKTYARAAA GLGYVPQTRD VFRSLTVEEN LFTGLKGRPR SELDEVYTIF PRLAERRHHN GAQLSGGEQQ MLSLARTLLG KPSVLLLDEP LEGLAPVICD RLMETIVDLA QSGEMTVVLV EQQIERALDF ADDVIVIERG RIAWSGRTER LRGERELVDA LLGVGIG
|
| |