| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_2215 |
|---|
| Symbol | |
|---|
| ID | 3907957 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris HaA2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007778 |
|---|
| Strand | + |
|---|
| Start bp | 2528433 |
|---|
| End bp | 2529122 |
|---|
| Gene Length | 690 bp |
|---|
| Protein Length | 229 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637884110 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_485831 |
|---|
| Protein GI | 86749335 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.231176 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGCCGGTCG GCCGACTGAT CGCTGCGATG GCGTTGATGC TGAGTGTGGC CGTGGCGACC
GGCGAAGAAG CTGCAAGTCC CGCCGGCCCG ATGACGTTCC GGATTCCAGC CCAACCGCTG
ATCGGAGCGC TGCAAGCTTT CAGTCAACAG AGCGGCGTGC AGGTGATGTT CGAGACCGCG
GCCGCGGCCG GCTTCAACGC GCCTTCGGTC GAAGGCGAGT TTACGCCGGA TATGGCACTG
CGGTTGTTGC TGGCGGACAC CGATCTCAAG ATCCGCTACA GCCGGTCGCG CGCCATCACG
CTGGCGCCGG TCACCGCCCC AGATCCCGAT CTGCCGCCAC CGCTTTCGCT CGGCGCCACC
GATTTGGCAC TCGAGACCTT GCATGTCGGC GGCCGCGACG CCGCCGACGC CAACCGGCTG
GGCGAATACG TCGCGTCGGT TCAGTCCGAC ATCCAGAAGG CGATGAGACG GGTCAACCGG
GCCCAAGGCG GCGAATACCG ATTTGCGGTT CGATTGTGGG TCGATCCAGC GTCGCGCGCT
ATCGCTCGCG CCGAACTCGA CGGCTCGACC GGCGACCCCG CCCGAGATGC CAGGATCGCC
GATCTGCTGC ACACCATGAC GCTGAGCCGT CAACCGCCGC CGAACGTGCC GCGGCCGATC
CGGTTCTTGG TTTCGATCAA AACGCTGTAG
|
|---|
| Protein sequence | MPVGRLIAAM ALMLSVAVAT GEEAASPAGP MTFRIPAQPL IGALQAFSQQ SGVQVMFETA
AAAGFNAPSV EGEFTPDMAL RLLLADTDLK IRYSRSRAIT LAPVTAPDPD LPPPLSLGAT
DLALETLHVG GRDAADANRL GEYVASVQSD IQKAMRRVNR AQGGEYRFAV RLWVDPASRA
IARAELDGST GDPARDARIA DLLHTMTLSR QPPPNVPRPI RFLVSIKTL
|
|---|
| |