Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_2165 |
Symbol | |
ID | 3909945 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | - |
Start bp | 2456474 |
End bp | 2457646 |
Gene Length | 1173 bp |
Protein Length | 390 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637884059 |
Product | transmembrane protein |
Protein accession | YP_485782 |
Protein GI | 86749286 |
COG category | [R] General function prediction only |
COG ID | [COG1999] Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.0585637 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGGTGG CCGCGACGCC ACCGATCGCG TCGAGCGAGG CGGGGTCGCT CGACGCCGGC TACGCGGCGA TCGACCGGCT CCGCGCCGAC CCGTCCGGAC GCGACGCGTT GGTCGCGCTG CTGGCGGAGC AGTCGCCGCT GTTCGCCGGC CGCAGCAGCA ACCAGGCGGC GCGGCTGCGC GGCTATGTGC TCGCCGCCTT CGAGACCTGC GGATTGCCGG ACGCGGCGAT GAGCATCGTC TGCGAGGAGC TGGAGAGCGG CATAGATCCG TTCGTCGTGG CCGCCGCCGC CCGGGCGGTC CGCTGCGCAT CCACGACTCC GGCTGAACTG CCCGCGCTGC TGCTCGCGGC AATCCGCAGG CTGCGCGGCG CCGACGACGT CGTCACGCTC GCGCCGGCCG ATGCGGCTGC GCCCGTGACC GTTTTGACCG AGCTGTTCCG GACGCTGCGC TGGCTCGGTC CGCGCGCCGC GGGGGTCGCG GCACCATTCG CCGAACTCTT GTCGCACGAT CAGGCGATGC TGTCAGACAC CGTGCGGCGC GAAGGCCGGC TCGCGCTCGG CGCGATCCGC AGCGCGGCGG AGTCGGCGCC GCCATCTTGC TGCGGCGCGC CGGCGCCGCT CGTGCTGCCG CACGACAACA GCGTACCCGC TGATGCCGAC ATCGATGTCG CCGCCATCGC ATTACAGGAC CAAGATGGCT CGGTCGCAAG CTTCGGCGAG ATATTTCGCG GCCGGCCGAG CGTGCTGACG TTCTTCTACA CGCGTTGCGC CAATCCCAAC AAATGCTCGC TGACGATCCA AAAGCTTGCG CAACTGCAGA CGCTGATCGC AGAGGCCGGC CTCCCCGAGG TCGTCAACGT CGCCGCGATC AGCTATGATG GCGCGTTCGA TCTGCCGCAT CGGTTGCGCA CCTATGGCGA GGCGCGTGGA ATGCGCTTCG ACCGGTTCAA CCGCATGCTG CGGACCATCG GCGATTTCGA GCCGGTGCGG CGATGGCTCG ATCTCGGCGT CGGCTACGGC GCCACCACGG TCAATCATCA TCGGCTCGAT CTCGTTGTAC TCGACCGCAG CATGCGCTGT GTCGAGCGGA TAGCACGCAG GCAATGGAAC GAGCACGAAT TGTTTGACAT AATCCGTCGC GCGCTTCGTA ACGACGGAAA TGTGCAGACC TGA
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Protein sequence | MTVAATPPIA SSEAGSLDAG YAAIDRLRAD PSGRDALVAL LAEQSPLFAG RSSNQAARLR GYVLAAFETC GLPDAAMSIV CEELESGIDP FVVAAAARAV RCASTTPAEL PALLLAAIRR LRGADDVVTL APADAAAPVT VLTELFRTLR WLGPRAAGVA APFAELLSHD QAMLSDTVRR EGRLALGAIR SAAESAPPSC CGAPAPLVLP HDNSVPADAD IDVAAIALQD QDGSVASFGE IFRGRPSVLT FFYTRCANPN KCSLTIQKLA QLQTLIAEAG LPEVVNVAAI SYDGAFDLPH RLRTYGEARG MRFDRFNRML RTIGDFEPVR RWLDLGVGYG ATTVNHHRLD LVVLDRSMRC VERIARRQWN EHELFDIIRR ALRNDGNVQT
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