Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_1945 |
Symbol | |
ID | 3908024 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | + |
Start bp | 2212912 |
End bp | 2214204 |
Gene Length | 1293 bp |
Protein Length | 430 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 637883839 |
Product | hypothetical protein |
Protein accession | YP_485564 |
Protein GI | 86749068 |
COG category | [C] Energy production and conversion [H] Coenzyme transport and metabolism |
COG ID | [COG0654] 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.165193 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGACA AGGTCATCAT CGCCGGCGGC GGCATCGGCG GGCTGGCGAC GGCGCTGACG CTGCATCAGA TCGGCGTGCC CTGCGTGGTC TATGAGGCGG CGCGCGAGAT GCGGCCGCTC GGCGTCGGCA TCAATCTGCA GCCCAACGCG GTGCGCGAGC TCGGCGATCT CGGCATCACC GAGGCCGATC TCGACCGCGT CGGCCTGCCG GCCAAGGAAT GGGCGCTGGT CGGCCTCAAC GGCAACGACA TCTACGCCGA GCCGCGCGGC CGGGACGCCG GCTATGCGTG GCCGCAATAT GCGGTGCATC GCGGCGCCTT CCACATGTTG CTGCACGACG AGGTGGTGAA GCGGCTTGGG CCGGATGCGG TGCGGCTCGG AAGCCGCGTC TCCGGCTATC GCAAGACCGC CCACGGCGTC GCTGCGACCG TGGAGCAGGC CGATGGCGGC CGCGCCGAGG TCGACGGCGC GCTGTTGATC GGCGCCGACG GCATCCACTC CGCCATCCGC GCGCAGATGC ATCCGGATCA GCCGCCGATC CATTGGGGCG GCGCGGTGAT GTGGCGCGGC ACCACCTGGG GCAGGCCGAC CCGCTCCGGC GCCTCCTTCA TCGGCCTCGG CACCCATCGC CAGCGCGTGG TGATCTATCC GATCTCGCAT CCCGATCCTG CGACCGGGCT GTCGATGATC AACTGGATCG CCGAAGTGAC GCTTGATAAC AGCGAAGGCT GGAAGCAACA GGGCTGGTTC CGGCAGGTCC CGACCAGCGA CTTCGCGCAT CATTTCGACG GCTGGGTGTG GGACTGGATC GACGTGCCGG CCTTGATCCG CGAATCCACC AGCGCATTCG AAAATCCGAT GATCGACCGC GACCCGGTGT CGACCTGGCG CGACGGCCCG GTGCTGCTGA TCGGCGACGC CGCGCATGCG ATGTATCCGA CCGGCTCCAA TGGCGGCAGC CAGGCGATCA TCGACGCCCG CGAACTCGGC GCCGCGATGG TGGCGCACGG CGCGAACGAA GCCGCGCTCG CGGCGTTCGA CGAAAAGCTC TGCGGCCCGA TCTCGCAACT GATCCTGCGC AACCGCGGCG CCGGGCCATT CGGCCTGTTG AACCTCGTCG ACGAGCGCTG CGGCGGCACG TTCGAGAACA TCGACGACGT CATCCCGCCG GCCGAACGCG CCGCCTTCAT GGCCGGCTAC AAGGCCGCGG CGGGCTTCGC CATCGAGAAG CTGAATGCGT CGCCGCCGAC GATTGCGCCG GGCGCGAGGG TCAAGGAGCG GGTCGGGGTG TAG
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Protein sequence | MSDKVIIAGG GIGGLATALT LHQIGVPCVV YEAAREMRPL GVGINLQPNA VRELGDLGIT EADLDRVGLP AKEWALVGLN GNDIYAEPRG RDAGYAWPQY AVHRGAFHML LHDEVVKRLG PDAVRLGSRV SGYRKTAHGV AATVEQADGG RAEVDGALLI GADGIHSAIR AQMHPDQPPI HWGGAVMWRG TTWGRPTRSG ASFIGLGTHR QRVVIYPISH PDPATGLSMI NWIAEVTLDN SEGWKQQGWF RQVPTSDFAH HFDGWVWDWI DVPALIREST SAFENPMIDR DPVSTWRDGP VLLIGDAAHA MYPTGSNGGS QAIIDARELG AAMVAHGANE AALAAFDEKL CGPISQLILR NRGAGPFGLL NLVDERCGGT FENIDDVIPP AERAAFMAGY KAAAGFAIEK LNASPPTIAP GARVKERVGV
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